RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PPP1R3AQ16821 1122 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 TMEM214Q6NUQ4 689 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 PRSS41Q7RTY9 318 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 ABHD11Q8NFV4 315 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 MYRIPQ8NFW9 859 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 VPS39Q96JC1 886 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 CYTH2Q99418 400 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 HAUS8Q9BT25 410 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 LRRC4CQ9HCJ2 640 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 MKKSQ9NPJ1 570 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 SLAMF7Q9NQ25 335 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 NOVA2Q9UNW9 492 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 PTPN13Q12923 2485 aa17.03■□□□□ 0.32
SCAMP4-213ENST00000621748 ESPL1Q14674 2120 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 PABPN1LA6NDY0 278 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 NPEPPSL1A6NEC2 478 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 H0YIG0 161 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 KLHL41O60662 606 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 IPO13O94829 963 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 FAM153BP0C7A2 387 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 ACPPP15309 386 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 AVPR1BP47901 424 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 EFNA3P52797 238 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 MEF2AQ02078 507 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 SRSF1Q07955 248 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 NAB1Q13506 487 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 FAM153CQ494X1 144 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 CATSPEREQ5SY80 951 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 CYS1Q717R9 158 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 TAOK1Q7L7X3 1001 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 ATCAYQ86WG3 371 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 ZC3H7AQ8IWR0 971 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 NKAPQ8N5F7 415 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 MFSD9Q8NBP5 474 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 KCT2Q8NC54 265 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 CAMKVQ8NCB2 501 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 OR4K1Q8NGD4 311 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 FBF1Q8TES7 1133 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 SLC13A3Q8WWT9 602 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 ATL1Q8WXF7 558 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 VPS50Q96JG6 964 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 ZNF160Q9HCG1 818 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 C14orf105Q9NVL8 296 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 RAB21Q9UL25 225 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 MTO1Q9Y2Z2 717 aaKnown RBP17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 SCN2AQ99250 2005 aa17.02■□□□□ 0.32
SCAMP4-213ENST00000621748 LRRK2Q5S007 2527 aa17.02■□□□□ 0.31
SCAMP4-213ENST00000621748 TCRBV9S1A1TA0A576 114 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 MAP2K7O14733 419 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 JRKO75564 520 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 BMP10O95393 424 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 HPP00738 406 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 C1QAP02745 245 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 COX6A1P12074 109 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 IL1RNP18510 177 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 GRK3P35626 688 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 CCR8P51685 355 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 GPX6P59796 221 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 FAAH2Q6GMR7 532 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 ASPGQ86U10 573 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 EFCAB3Q8N7B9 438 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 ZNF740Q8NDX6 193 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 ZCCHC10Q8TBK6 192 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 ANKRD7Q92527 254 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 NEIL2Q969S2 332 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 THOC3Q96J01 351 aaKnown RBP17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 LHPPQ9H008 270 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 SPNS1Q9H2V7 528 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 CSAG2Q9Y5P2 127 aa17.01■□□□□ 0.31
SCAMP4-213ENST00000621748 CLEC18AA5D8T8 446 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 SGK494L7N484 410 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 VPS4BO75351 444 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 WISP3O95389 354 aaPredicted RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 NSA2O95478 260 aaKnown RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 HEXBP07686 556 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 UQCRFS1P47985 274 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 SLC12A2P55011 1212 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 TSNQ15631 228 aaKnown RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 UAP1Q16222 522 aaPredicted RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 AGAP7PQ5VUJ5 663 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 CLEC18BQ6UXF7 455 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 NDUFAF7Q7L592 441 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 THOC6Q86W42 341 aaKnown RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 PDSS2Q86YH6 399 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 CNPY4Q8N129 248 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 ZADH2Q8N4Q0 377 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 AMER2Q8N7J2 671 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 PPM1NQ8N819 430 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 CLEC18CQ8NCF0 446 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 SLC5A11Q8WWX8 675 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 TM9SF4Q92544 642 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 CAVIN3Q969G5 261 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 MOCOSQ96EN8 888 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 C19orf60Q96EN9 201 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 TSNARE1Q96NA8 513 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 AGAP4Q96P64 663 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 SARGQ9BW04 601 aa17■□□□□ 0.31
SCAMP4-213ENST00000621748 UNKQ9C0B0 810 aaKnown RBP17■□□□□ 0.31
SCAMP4-213ENST00000621748 CAB39LQ9H9S4 337 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms