RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 LRIG3Q6UXM1 1119 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 COX15Q7KZN9 410 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 PRSS41Q7RTY9 318 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 ASPGQ86U10 573 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 TMEM151BQ8IW70 566 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 SHISA5Q8N114 240 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 TTC29Q8NA56 475 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-217ENST00000621474 OR52B6Q8NGF0 335 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 PROKR1Q8TCW9 393 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 CT55Q8WUE5 264 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-217ENST00000621474 SLC13A3Q8WWT9 602 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 CCNL2Q96S94 520 aaPredicted RBP13.63□□□□□ -0.23
CBWD3-217ENST00000621474 SLC7A5P2Q9GIP4 190 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 GRID1Q9ULK0 1009 aa13.63□□□□□ -0.23
CBWD3-217ENST00000621474 MRPS18BQ9Y676 258 aaKnown RBP13.63□□□□□ -0.23
CBWD3-217ENST00000621474 ATMQ13315 3056 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 SMG1Q96Q15 3661 aaKnown RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CACNA1BQ00975 2339 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 C4orf51C9J302 202 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CLGNO14967 610 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 NDUFS4O43181 175 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 TYROBPO43914 113 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CNOT3O75175 753 aaKnown RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ONECUT2O95948 504 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 KLK3P07288 261 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CCNYL3P0C7X3 344 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 TCN2P20062 427 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ALAS2P22557 587 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ATP5F1P24539 256 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 AHRP35869 848 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 DLSTP36957 453 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 HERVK_113P63132 956 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CYP4F2P78329 520 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 FAM214AQ32MH5 1076 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CCDC153Q494R4 210 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 MANEAQ5SRI9 462 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ZNF678Q5SXM1 525 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 FAM69BQ5VUD6 431 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 GARNL3Q5VVW2 1013 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 TMIGD1Q6UXZ0 262 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 LRRC69Q6ZNQ3 347 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 METTL27Q8N6F8 245 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ZNF483Q8TF39 744 aaPredicted RBP13.62□□□□□ -0.23
CBWD3-217ENST00000621474 MR1Q95460 341 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ERVK-6Q9BXR3 956 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 NT5DC2Q9H857 520 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 IPPKQ9H8X2 491 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 TXLNGQ9NUQ3 528 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 ZNF225Q9UK10 706 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 PLLPQ9Y342 182 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 PCSK5Q92824 1860 aa13.62□□□□□ -0.23
CBWD3-217ENST00000621474 CACNA1GO43497 2377 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 RGS16O15492 202 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SPAG7O75391 227 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PRKAA2P54646 552 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 CDH13P55290 713 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 FOXL2P58012 376 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 DCDP81605 110 aaKnown RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 IRF8Q02556 426 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 TRAF3Q13114 568 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PWP1Q13610 501 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SLC9A5Q14940 896 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 MUM1Q2TAK8 710 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 UNC50Q53HI1 259 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 GRHL2Q6ISB3 625 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 MRPL14Q6P1L8 145 aaKnown RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 ZYG11AQ6WRX3 759 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 EXOC3L1Q86VI1 746 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 CAMKVQ8NCB2 501 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 NT5CQ8TCD5 201 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 L3HYPDHQ96EM0 354 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PGM2Q96G03 612 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 CDK15Q96Q40 435 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 DPH2Q9BQC3 489 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 EFCAB11Q9BUY7 163 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SLC6A16Q9GZN6 736 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PITHD1Q9GZP4 211 aaPredicted RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 NOL11Q9H8H0 719 aaKnown RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SLC17A7Q9P2U7 560 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PCDHGA6Q9Y5G7 932 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 MAU2Q9Y6X3 613 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 C21orf140B9A014 251 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 AGPSO00116 658 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 TXNDC9O14530 226 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 KATNA1O75449 491 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 SLC35G6P0C7Q6 338 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 TSPAN8P19075 237 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 TAC1P20366 129 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 IMPDH1P20839 514 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 CXCR2P25025 360 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 OR1D4P47884 311 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 RPS18P62269 152 aaKnown RBP13.61□□□□□ -0.23
CBWD3-217ENST00000621474 DNASE1L3Q13609 305 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 FAM53BQ14153 422 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PCLAFQ15004 111 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 NKAIN1Q4KMZ8 207 aa13.61□□□□□ -0.23
CBWD3-217ENST00000621474 PDSS2Q86YH6 399 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms