RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 FKBP10Q96AY3 582 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 WDR34Q96EX3 536 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 PTCD3Q96EY7 689 aaKnown RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 MACROD1Q9BQ69 325 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 DRC3Q9H069 523 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 ZNF304Q9HCX3 659 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 TMEM216Q9P0N5 145 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 COPG2Q9UBF2 871 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 TCFL5Q9UL49 500 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 CDC14AQ9UNH5 594 aa17.4■□□□□ 0.38
LITAF-220ENST00000620789 MRPS2Q9Y399 296 aaKnown RBP17.4■□□□□ 0.38
LITAF-220ENST00000620789 TLDC2A0PJX2 215 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 FOXO6A8MYZ6 492 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 STX16-NPEPL1H3BU86 382 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 STX16O14662 325 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 NDUFS4O43181 175 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 CD63P08962 238 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 PRKAR1AP10644 381 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 PWP1Q13610 501 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 FAM53BQ14153 422 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 DOC2AQ14183 400 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 E2F2Q14209 437 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 RBBP5Q15291 538 aaKnown RBP17.39■□□□□ 0.37
LITAF-220ENST00000620789 TMEM214Q6NUQ4 689 aaKnown RBP17.39■□□□□ 0.37
LITAF-220ENST00000620789 C16orf46Q6P387 395 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 TMIGD1Q6UXZ0 262 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 SH2D5Q6ZV89 423 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 COX15Q7KZN9 410 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 OVCH1Q7RTY7 1134 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 KRT78Q8N1N4 520 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 TEX9Q8N6V9 391 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 KCT2Q8NC54 265 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 EFCAB11Q9BUY7 163 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 ROPN1BQ9BZX4 212 aaPredicted RBP17.39■□□□□ 0.37
LITAF-220ENST00000620789 PITHD1Q9GZP4 211 aaPredicted RBP17.39■□□□□ 0.37
LITAF-220ENST00000620789 NT5DC2Q9H857 520 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 ROPN1Q9HAT0 212 aaPredicted RBP17.39■□□□□ 0.37
LITAF-220ENST00000620789 DCDC2Q9UHG0 476 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 PADI2Q9Y2J8 665 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 ANGPTL3Q9Y5C1 460 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 MAU2Q9Y6X3 613 aa17.39■□□□□ 0.37
LITAF-220ENST00000620789 LRRC14BA6NHZ5 514 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 FOXS1O43638 330 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 CNOT3O75175 753 aaKnown RBP17.38■□□□□ 0.37
LITAF-220ENST00000620789 KLF7O75840 302 aaPredicted RBP17.38■□□□□ 0.37
LITAF-220ENST00000620789 SIX3O95343 332 aaPredicted RBP17.38■□□□□ 0.37
LITAF-220ENST00000620789 ALBP02768 609 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 SERPIND1P05546 499 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 CD22P20273 847 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 EEF1DP29692 281 aaKnown RBP17.38■□□□□ 0.37
LITAF-220ENST00000620789 CASP2P42575 452 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 SNRPNP63162 240 aaKnown RBP17.38■□□□□ 0.37
LITAF-220ENST00000620789 IRF8Q02556 426 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 RGS1Q08116 209 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 PCDH1Q08174 1060 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 CHIT1Q13231 466 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 ERV3-1Q14264 604 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 TBCCQ15814 346 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 FAM69BQ5VUD6 431 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 TRPV3Q8NET8 790 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 TTLQ8NG68 377 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 NT5CQ8TCD5 201 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 COL26A1Q96A83 441 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 MOCOSQ96EN8 888 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 SLC26A1Q9H2B4 701 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 LGALS13Q9UHV8 139 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 PLAAQ9Y263 795 aa17.38■□□□□ 0.37
LITAF-220ENST00000620789 CHD6Q8TD26 2715 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 A0A0A6YYC8 382 aaPredicted RBP17.37■□□□□ 0.37
LITAF-220ENST00000620789 I3L1I5 382 aaPredicted RBP17.37■□□□□ 0.37
LITAF-220ENST00000620789 E2F3O00716 465 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 PRPF4O43172 522 aaKnown RBP eCLIP17.37■□□□□ 0.37
LITAF-220ENST00000620789 GLRA3O75311 464 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 WFS1O76024 890 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 TAC1P20366 129 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 FBLP22087 321 aaKnown RBP17.37■□□□□ 0.37
LITAF-220ENST00000620789 GSTM2P28161 218 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 AVPR1BP47901 424 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 PIK3CGP48736 1102 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 RHDQ02161 417 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 LAPTM5Q13571 262 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 IL10RAQ13651 578 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 GTF2H2Q13888 395 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 DSG2Q14126 1118 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 UGT8Q16880 541 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 PAGE2BQ5JRK9 111 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 ATP1A1-AS1Q5TC04 95 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 GTF2H2CQ6P1K8 395 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 GOLGA7Q7Z5G4 137 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.37■□□□□ 0.37
LITAF-220ENST00000620789 ZCCHC10Q8TBK6 192 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 MMABQ96EY8 250 aaPredicted RBP17.37■□□□□ 0.37
LITAF-220ENST00000620789 SEC16BQ96JE7 1060 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 CATSPER2Q96P56 530 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 TMEM109Q9BVC6 243 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 WDR54Q9H977 334 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 CTSFQ9UBX1 484 aa17.37■□□□□ 0.37
LITAF-220ENST00000620789 PTRH2Q9Y3E5 179 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms