RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 GRK3P35626 688 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 CCR8P51685 355 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 CBLBQ13191 982 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 MFAP5Q13361 173 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 PCOLCEQ15113 449 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 PPP1R3AQ16821 1122 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 TMEM205Q6UW68 189 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 CEP97Q8IW35 865 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 CATSPER1Q8NEC5 780 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 OR4K1Q8NGD4 311 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 OR51Q1Q8NH59 317 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 BRIX1Q8TDN6 353 aaKnown RBP16.24■□□□□ 0.19
HMGN3-203ENST00000620514 ANKRD49Q8WVL7 239 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 ATL1Q8WXF7 558 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 NEIL2Q969S2 332 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 MOCOSQ96EN8 888 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 ERP44Q9BS26 406 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 MCMBPQ9BTE3 642 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 VN1R1Q9GZP7 353 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 EPS8L2Q9H6S3 715 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 SAYSD1Q9NPB0 183 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 PTGFRNQ9P2B2 879 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 COPG1Q9Y678 874 aaKnown RBP16.24■□□□□ 0.19
HMGN3-203ENST00000620514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
HMGN3-203ENST00000620514 SCN3AQ9NY46 2000 aa16.24■□□□□ 0.19
HMGN3-203ENST00000620514 CNTRLQ7Z7A1 2325 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 IGHV3-20A0A0C4DH32 117 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 FAM187AA6NFU0 413 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 ZNF860A6NHJ4 632 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 CXorf49A8MYA2 514 aaPredicted RBP16.23■□□□□ 0.19
HMGN3-203ENST00000620514 OR1F1O43749 312 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 RDH16O75452 317 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 AGFG2O95081 481 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 SERPINA7P05543 415 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 SSTR1P30872 391 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 SOX11P35716 441 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 XCR1P46094 333 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 MINDY4Q4G0A6 757 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 MFSD4BQ5TF39 518 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 LANCL3Q6ZV70 420 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 NKAPQ8N5F7 415 aaKnown RBP16.23■□□□□ 0.19
HMGN3-203ENST00000620514 SIRT6Q8N6T7 355 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 BBOF1Q8ND07 529 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 PRR7Q8TB68 274 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 PYROXD1Q8WU10 500 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 SLC5A11Q8WWX8 675 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 VPS39Q96JC1 886 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 TSNARE1Q96NA8 513 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 PSMG3-AS1Q96PY0 264 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 LMF1Q96S06 567 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 ZNF700Q9H0M5 742 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 RHOJQ9H4E5 214 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 ANKHQ9HCJ1 492 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 RIC8BQ9NVN3 520 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 PLA2G3Q9NZ20 509 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 GRHL1Q9NZI5 618 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 NAALAD2Q9Y3Q0 740 aa16.23■□□□□ 0.19
HMGN3-203ENST00000620514 PRRC2CQ9Y520 2896 aaKnown RBP16.23■□□□□ 0.19
HMGN3-203ENST00000620514 TRBC2A0A5B9 178 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CTAGE15A4D2H0 777 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CBX6O95503 412 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 B3GALT4O96024 378 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 SLC35G6P0C7Q6 338 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 RNF224P0DH78 156 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 C8orf89P0DMQ9 161 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 ZNF169Q14929 603 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 C18orf21Q32NC0 220 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 B3GNTL1Q67FW5 361 aaPredicted RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CTAGE6Q86UF2 777 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 THOC6Q86W42 341 aaKnown RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 OR5T3Q8NGG3 340 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 IMMP1LQ96LU5 166 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CYTH2Q99418 400 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 BARD1Q99728 777 aaKnown RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 SARGQ9BW04 601 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 RBCK1Q9BYM8 510 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 UNKQ9C0B0 810 aaKnown RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 CAB39LQ9H9S4 337 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 WHRNQ9P202 907 aa16.22■□□□□ 0.19
HMGN3-203ENST00000620514 MTO1Q9Y2Z2 717 aaKnown RBP16.22■□□□□ 0.19
HMGN3-203ENST00000620514 USP9YO00507 2555 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-203ENST00000620514 NDC80O14777 642 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 PCDH17O14917 1159 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 NDUFS4O43181 175 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 DNAJB6O75190 326 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 SEC24DO94855 1032 aaPredicted RBP16.21■□□□□ 0.19
HMGN3-203ENST00000620514 SERPIND1P05546 499 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 ITGAMP11215 1152 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 CASQ1P31415 396 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 TSFMP43897 325 aaKnown RBP16.21■□□□□ 0.19
HMGN3-203ENST00000620514 SCTRP47872 440 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 CSHL1Q14406 222 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 TSNQ15631 228 aaKnown RBP16.21■□□□□ 0.19
HMGN3-203ENST00000620514 MAATS1Q7Z4T9 603 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 AFAP1L2Q8N4X5 818 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 METTL21AQ8WXB1 218 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 FAM129AQ9BZQ8 928 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 NSMCE4AQ9NXX6 385 aa16.21■□□□□ 0.19
HMGN3-203ENST00000620514 CTNNAL1Q9UBT7 734 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms