RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TMEM79Q9BSE2 394 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 CRB3Q9BUF7 120 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 YIPF2Q9BWQ6 316 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 SPNS1Q9H2V7 528 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 P4HTMQ9NXG6 502 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 RNF112Q9ULX5 631 aa15.19■□□□□ 0.02
BRCA1-228ENST00000618469 TRBC2A0A5B9 178 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 VSTM2BA6NLU5 285 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 NDUFS4O43181 175 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 FOXS1O43638 330 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 OR1F1O43749 312 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 LCMT2O60294 686 aaKnown RBP15.18■□□□□ 0.02
BRCA1-228ENST00000618469 S100BP04271 92 aaPredicted RBP15.18■□□□□ 0.02
BRCA1-228ENST00000618469 RHOXF2BP0C7M4 288 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 IL1RNP18510 177 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 MMP11P24347 488 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 COL8A1P27658 744 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 CRABP2P29373 138 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 SLC6A12P48065 614 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 SNRPNP63162 240 aaKnown RBP15.18■□□□□ 0.02
BRCA1-228ENST00000618469 REEP5Q00765 189 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 KLC1Q07866 573 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 KLRB1Q12918 225 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 RBBP7Q16576 425 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 FBXO48Q5FWF7 155 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 TCTN3Q6NUS6 607 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 PRSS41Q7RTY9 318 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 TCAIMQ8N3R3 496 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 TBC1D19Q8N5T2 526 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 AMER3Q8N944 861 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 CAMKVQ8NCB2 501 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 ZNF740Q8NDX6 193 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 RHOXF2Q9BQY4 288 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 SLC25A23Q9BV35 468 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 ALG9Q9H6U8 611 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 SNX15Q9NRS6 342 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 CD274Q9NZQ7 290 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 TRPC4Q9UBN4 977 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 NFU1Q9UMS0 254 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 KCNE2Q9Y6J6 123 aa15.18■□□□□ 0.02
BRCA1-228ENST00000618469 A6NL46 340 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 PDGFAP04085 211 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 SERPIND1P05546 499 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 LTA4HP09960 611 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 ZGLP1P0C6A0 271 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 TFEBP19484 476 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 GDF5P43026 501 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 AVPR1BP47901 424 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 SERPINB8P50452 374 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 PGDP52209 483 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 MAT1AQ00266 395 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 IRF9Q00978 393 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 DLG1Q12959 904 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 RAPSNQ13702 412 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 FAM53BQ14153 422 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 SYT16Q17RD7 645 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 VWA2Q5GFL6 755 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 DCAF10Q5QP82 559 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 TMEM214Q6NUQ4 689 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 ASB18Q6ZVZ8 466 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 CLEC1AQ8NC01 280 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 KCT2Q8NC54 265 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 PDPRQ8NCN5 879 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 LRRN4CLQ8ND94 238 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 OR4K1Q8NGD4 311 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 OR9A4Q8NGU2 314 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 UHMK1Q8TAS1 419 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 SLC13A3Q8WWT9 602 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 FER1L6-AS2Q96M78 137 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 AIF1LQ9BQI0 150 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 FUT8Q9BYC5 575 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 CNOT10Q9H9A5 744 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 IGSF5Q9NSI5 407 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 C14orf105Q9NVL8 296 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 FBXL4Q9UKA2 621 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 G3BP2Q9UN86 482 aaKnown RBP15.17■□□□□ 0.02
BRCA1-228ENST00000618469 MAP4K5Q9Y4K4 846 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 HS3ST3B1Q9Y662 390 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 MED13Q9UHV7 2174 aa15.17■□□□□ 0.02
BRCA1-228ENST00000618469 IGLV3-12A0A075B6K2 115 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 A0A087X1B8 175 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 HMX2A2RU54 273 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SUPT3HB4E1H0 165 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 AGPSO00116 658 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 MASP2O00187 686 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SOCS6O14544 535 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SEMA7AO75326 666 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 ALOX12BO75342 701 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SUPT3HO75486 399 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 IPO13O94829 963 aaKnown RBP15.16■□□□□ 0.02
BRCA1-228ENST00000618469 NSA2O95478 260 aaKnown RBP15.16■□□□□ 0.02
BRCA1-228ENST00000618469 IGHEP01854 428 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 INHBAP08476 426 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 VARSP26640 1264 aaKnown RBP15.16■□□□□ 0.02
BRCA1-228ENST00000618469 SLC26A3P40879 764 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 HSPA7P48741 367 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 CD97P48960 835 aa15.16■□□□□ 0.02
BRCA1-228ENST00000618469 CDC16Q13042 620 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms