RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 ARHGAP10A1A4S6 786 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 AMD1P17707 334 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 PRPS1L1P21108 318 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 HPCAL1P37235 193 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 GSTM5P46439 218 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 AFF3P51826 1226 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 CLDN8P56748 225 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 EIF2B5Q13144 721 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 NFYCQ13952 458 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 MAP7Q14244 749 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 C1orf146Q5VVC0 180 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 MSANTD1Q6ZTZ1 278 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 RABEPKQ7Z6M1 372 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 OOSP2Q86WS3 158 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 ULK2Q8IYT8 1036 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 C2orf73Q8N5S3 287 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 VPS37AQ8NEZ2 397 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 OR2I1PQ8NGU4 316 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 JADE3Q92613 823 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 GATA6Q92908 595 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 APOLD1Q96LR9 279 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 RHBGQ9H310 441 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 TM9SF3Q9HD45 589 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 SPAG4Q9NPE6 437 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 ANKMY1Q9P2S6 941 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 ZMIZ1Q9ULJ6 1067 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 ICKQ9UPZ9 632 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 CEP295Q9C0D2 2601 aa16.12■□□□□ 0.17
TRAPPC3-210ENST00000617904 NUMA1Q14980 2115 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 CACNA1EQ15878 2313 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 FRYQ5TBA9 3013 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SPAARA0A1B0GVQ0 90 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 TRBC2A0A5B9 178 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 ARHGAP33O14559 1287 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SCAMP1O15126 338 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 EEDO75530 441 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 CSF2P04141 144 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 BCKDHAP12694 445 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 S100A3P33764 101 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 CPOXP36551 454 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 ATXN3P54252 364 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 PSME3P61289 254 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 UFM1P61960 85 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 REEP5Q00765 189 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SRSF11Q05519 484 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 TGM3Q08188 693 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SAMD4BQ5PRF9 694 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 NOXRED1Q6NXP6 359 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SLC22A18ASQ8N1D0 253 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 FBXW8Q8N3Y1 598 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 MINDY1Q8N5J2 469 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 TRPV3Q8NET8 790 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 NPAS2Q99743 824 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SH3GL1Q99961 368 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 DMRT3Q9NQL9 472 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SIRT5Q9NXA8 310 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 ADA2Q9NZK5 511 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 CPNE7Q9UBL6 633 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 L3MBTL1Q9Y468 752 aa16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.11■□□□□ 0.17
TRAPPC3-210ENST00000617904 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 ANKRD12Q6UB98 2062 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 GNG14A0A1W2PPG7 69 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 MAGEB17A8MXT2 336 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 C2orf74A8MZ97 194 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 VILLO15195 856 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 BCAT2O15382 392 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 HYAL3O43820 417 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 MGRN1O60291 552 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 RASSF9O75901 435 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 SEMA3DO95025 777 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 ANXA6P08133 673 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 CHRM5P08912 532 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 CD59P13987 128 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 NME1P15531 152 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 CD22P20273 847 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 SLC19A1P41440 591 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 RPS13P62277 151 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 SIM1P81133 766 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 VPS26BQ4G0F5 336 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 TPRG1LQ5T0D9 272 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 FAM129CQ86XR2 697 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 FAM13CQ8NE31 585 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 OR4E2Q8NGC2 313 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 OR4K1Q8NGD4 311 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 OR9I1Q8NGQ6 314 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 PROKR1Q8TCW9 393 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 ZDHHC1Q8WTX9 485 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 DNASE2BQ8WZ79 361 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 MENTQ9BUN1 341 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 XKR8Q9H6D3 395 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 ATAD3AQ9NVI7 634 aa16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-210ENST00000617904 BAIAP2L1Q9UHR4 511 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms