RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 SIX5Q8N196 739 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ICA1LQ8NDH6 482 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 CHTF18Q8WVB6 975 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 CIDECQ96AQ7 238 aaPredicted RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 ZNF583Q96ND8 569 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ANKRD27Q96NW4 1050 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 OR2M4Q96R27 311 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 DPH2Q9BQC3 489 aaPredicted RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 RPF2Q9H7B2 306 aaKnown RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 DMRT3Q9NQL9 472 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 VPS4AQ9UN37 437 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 ICKQ9UPZ9 632 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 EXO1Q9UQ84 846 aaKnown RBP7.48□□□□□ -1.21
NEK3-207ENST00000617054 LRRC42Q9Y546 428 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 CABIN1Q9Y6J0 2220 aa7.48□□□□□ -1.21
NEK3-207ENST00000617054 RFXANKO14593 260 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 CKMT2P17540 419 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 DGKEP52429 567 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TAS2R50P59544 299 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 SRP54P61011 504 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 RHDQ02161 417 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PPP1R8Q12972 351 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 FZD5Q13467 585 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 HIST2H2ACQ16777 129 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 ALG11Q2TAA5 492 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ZNF385BQ569K4 471 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 HIST2H2AA3Q6FI13 130 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ZNF551Q7Z340 670 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 DTWD1Q8N5C7 304 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 FAM86B1Q8N7N1 296 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 OR2A1Q8NGT9 310 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 C11orf24Q96F05 449 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 PANX1Q96RD7 426 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PAIP1Q9H074 479 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 FBXL21Q9UKT6 434 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 FANCMQ8IYD8 2048 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ANKDD1BA6NHY2 528 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ISM1B1AKI9 464 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PRKRAO75569 313 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 PRPS2P11908 318 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 HTR1BP28222 390 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PEBP1P30086 187 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 KIR3DL1P43629 444 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 WNT3P56703 355 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 CYP4F3Q08477 520 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 CSTF3Q12996 717 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 NFATC4Q14934 902 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 FBXO43Q4G163 708 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 GLYATQ6IB77 296 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 HMBOX1Q6NT76 420 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TRIM73Q86UV7 250 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 DPP10Q8N608 796 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TSPEARQ8WU66 669 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 WDR92Q96MX6 357 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TRAPPC9Q96Q05 1148 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ZNF184Q99676 751 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 CIB1Q99828 191 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 CENPKQ9BS16 269 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 KLHL31Q9H511 634 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 SPASTQ9UBP0 616 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 SCML1Q9UN30 329 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PCDHGB4Q9UN71 923 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 PCDHGB5Q9Y5G0 923 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 MDC1Q14676 2089 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 EME2A4GXA9 379 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 PDLIM1O00151 329 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TPD52L2O43399 206 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 DCNP07585 359 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 HSD17B1P14061 328 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 SLC19A1P41440 591 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 MAPK9P45984 424 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 MRPL19P49406 292 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 RAB28P51157 221 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 KIAA1614Q5VZ46 1190 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 GPR153Q6NV75 609 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 LCTLQ6UWM7 567 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ANGPTL8Q6UXH0 198 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 NRROSQ86YC3 692 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 LAS2Q8IYD9 372 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TSTD1Q8NFU3 115 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 OR10G6Q8NH81 332 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 SMPDL3AQ92484 453 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 GUCD1Q96NT3 240 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 TIMM29Q9BSF4 260 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 EFCAB11Q9BUY7 163 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 MIR1-1HGQ9H1L0 117 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 POLMQ9NP87 494 aaPredicted RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 AASDHPPTQ9NRN7 309 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 RIMS3Q9UJD0 308 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 RUVBL1Q9Y265 456 aaKnown RBP7.47□□□□□ -1.21
NEK3-207ENST00000617054 FREM2Q5SZK8 3169 aa7.47□□□□□ -1.21
NEK3-207ENST00000617054 ZDBF2Q9HCK1 2354 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 PRSS51A0A1B0GVH4 220 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 TCRBV3S1A0A5B6 114 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 GLOD5A6NK44 160 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 PLPP1O14494 284 aa7.46□□□□□ -1.21
NEK3-207ENST00000617054 TXNDC9O14530 226 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms