RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 PGBD3Q8N328 593 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 POLR2J2Q9GZM3 115 aaKnown RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 PPP2CAP67775 309 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 NPTX1Q15818 432 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 FANK1Q8TC84 345 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 PTERQ96BW5 349 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 CPXM1Q96SM3 734 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 RAP2CQ9Y3L5 183 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 SCN9AQ15858 1988 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 RGPD8O14715 1765 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 hCG_1818297A0A087WSY0 165 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 H0Y8G0 127 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 RPS17P08708 135 aaKnown RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 TNK1Q13470 666 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 TECTBQ96PL2 329 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 KBTBD13C9JR72 458 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 PKMP14618 531 aaKnown RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 SERPINA4P29622 427 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 SLC6A17Q9H1V8 727 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 CPNE5Q9HCH3 593 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 ARL15Q9NXU5 204 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 MED16Q9Y2X0 877 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 U3KQV3 271 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 KCPQ6ZWJ8 1503 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 OR10H2O60403 315 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 ADH1CP00326 375 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 BCKDHAP12694 445 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 IGFALSP35858 605 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 CYCSP99999 105 aaKnown RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 DBPQ10586 325 aaPredicted RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 BLNKQ8WV28 456 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 MOCOSQ96EN8 888 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 PTPRHQ9HD43 1115 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM59LQ9UK28 342 aa9.03□□□□□ -0.96
COL12A1-211ENST00000615798 MRTO4Q9UKD2 239 aaKnown RBP9.03□□□□□ -0.96
COL12A1-211ENST00000615798 WASH3PC4AMC7 463 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 CDH5P33151 784 aaPredicted RBP9.02□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF41P51814 821 aaPredicted RBP9.02□□□□□ -0.96
COL12A1-211ENST00000615798 ACTBP60709 375 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 ACTG1P63261 375 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 PHYHD1Q5SRE7 291 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 DACT2Q5SW24 774 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 DBX2Q6ZNG2 339 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 LNX1Q8TBB1 728 aaPredicted RBP9.02□□□□□ -0.96
COL12A1-211ENST00000615798 PCDHGA7Q9Y5G6 932 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 FLRT2O43155 660 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.96
COL12A1-211ENST00000615798 GRIK2Q13002 908 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 CLEC10AQ8IUN9 316 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 OR5K1Q8NHB7 308 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 NSMAFQ92636 917 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 KIF25Q9UIL4 384 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 TSPAN16Q9UKR8 245 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 DNPEPQ9ULA0 475 aa9.02□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 H7C4K7 107 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 SCELO95171 688 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 HTR3BO95264 441 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 OR8U9P0C7N5 309 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 ANXA8P13928 327 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 DUSP4Q13115 394 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 ZNF177Q13360 481 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 FBXL21Q9UKT6 434 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 A0A1B0GV50 99 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 GJB6O95452 261 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 PTNP21246 168 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 POU4F3Q15319 338 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 RBM23Q86U06 439 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 EFCAB3Q8N7B9 438 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 DDX43Q9NXZ2 648 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 OR10H1Q9Y4A9 318 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 DAPL1A0PJW8 107 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 RFXANKO14593 260 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 NSA2O95478 260 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 MYL3P08590 195 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 MAOBP27338 520 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 TAS2R31P59538 309 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 HABP2Q14520 560 aaPredicted RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 ZC3H14Q6PJT7 736 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 TRAPPC5Q8IUR0 188 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 NIPA2Q8N8Q9 360 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 ISOC1Q96CN7 298 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 NTPCRQ9BSD7 190 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 KCNK13Q9HB14 408 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 TLR8Q9NR97 1041 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 M0QYT0 321 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 TGFB1I1O43294 461 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 F10P00742 488 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 LTA4HP09960 611 aaKnown RBP9.02□□□□□ -0.97
COL12A1-211ENST00000615798 ADRA1DP25100 572 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 GKP32189 559 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 LRRC37A5PQ49AS3 106 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 MBD3L1Q8WWY6 194 aa9.02□□□□□ -0.97
COL12A1-211ENST00000615798 RXFP2Q8WXD0 754 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms