RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 THAP11Q96EK4 314 aa15.9■□□□□ 0.14
CBWD3-211ENST00000615061 MESP1Q9BRJ9 268 aa15.9■□□□□ 0.14
CBWD3-211ENST00000615061 SLC26A1Q9H2B4 701 aa15.9■□□□□ 0.14
CBWD3-211ENST00000615061 PELI2Q9HAT8 420 aa15.9■□□□□ 0.14
CBWD3-211ENST00000615061 NUDT4Q9NZJ9 180 aa15.9■□□□□ 0.14
CBWD3-211ENST00000615061 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.9■□□□□ 0.14
CBWD3-211ENST00000615061 V9GYY5 206 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-211ENST00000615061 NUP210LQ5VU65 1888 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 EIF4E1BA6NMX2 242 aaKnown RBP15.89■□□□□ 0.13
CBWD3-211ENST00000615061 MASP2O00187 686 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 NDUFS4O43181 175 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 CCNT2O60583 730 aaKnown RBP15.89■□□□□ 0.13
CBWD3-211ENST00000615061 KRT38O76015 456 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 ALBP02768 609 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 SERPIND1P05546 499 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 PIM1P11309 404 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-211ENST00000615061 GNAZP19086 355 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 EPORP19235 508 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 FBLP22087 321 aaKnown RBP15.89■□□□□ 0.13
CBWD3-211ENST00000615061 SLCO4C1Q6ZQN7 724 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 CAMKVQ8NCB2 501 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 THAP4Q8WY91 577 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 DNAJC11Q9NVH1 559 aa15.89■□□□□ 0.13
CBWD3-211ENST00000615061 VSTM2BA6NLU5 285 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 TK2O00142 265 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 IPO13O94829 963 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 S100BP04271 92 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 TNFRSF8P28908 595 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 KCNAB2Q13303 367 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 DSG2Q14126 1118 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 FAM53BQ14153 422 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 SSPNQ14714 243 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 ACAP2Q15057 778 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 RBBP5Q15291 538 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 TAOK1Q7L7X3 1001 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 PPP1R32Q7Z5V6 425 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 CCDC91Q7Z6B0 441 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 MRGPREQ86SM8 312 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 LAPTM4BQ86VI4 370 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 EIF1ADQ8N9N8 165 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 SNX31Q8N9S9 440 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 RHEBL1Q8TAI7 183 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 STT3BQ8TCJ2 826 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 MVB12AQ96EY5 273 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 AIF1LQ9BQI0 150 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 YIPF2Q9BWQ6 316 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 CD244Q9BZW8 370 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 WDR54Q9H977 334 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 CNOT10Q9H9A5 744 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 GEMIN8Q9NWZ8 242 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 TRPC4Q9UBN4 977 aa15.88■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF282Q9UDV7 671 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 GCN1Q92616 2671 aaKnown RBP15.88■□□□□ 0.13
CBWD3-211ENST00000615061 MAP2K7O14733 419 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 B3GALT4O96024 378 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SHBGP04278 402 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SLC35G6P0C7Q6 338 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 C1GALT1C1LP0DN25 315 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 VSNL1P62760 191 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 KLC1Q07866 573 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SLBPQ14493 270 aaKnown RBP eCLIP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 NDUFA9Q16795 377 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 TECRLQ5HYJ1 363 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ADGRD1Q6QNK2 874 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 PDSS2Q86YH6 399 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ABHD17AQ96GS6 310 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ING2Q9H160 280 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ZFP69BQ9UJL9 534 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 CDC14AQ9UNH5 594 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 LRRC14BA6NHZ5 514 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 K7EM74 188 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SGK494L7N484 410 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 RFPL1O75677 317 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 CD63P08962 238 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SNRPAP09012 282 aaKnown RBP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ZGLP1P0C6A0 271 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 CD22P20273 847 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 CNTFP26441 200 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 HNF4AP41235 474 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 PDK4Q16654 411 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 PFKFB4Q16877 469 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ATG9BQ674R7 924 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ADNP2Q6IQ32 1131 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 RAB43Q86YS6 212 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 APLFQ8IW19 511 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF843Q8N446 348 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 UBLCP1Q8WVY7 318 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 MIEF2Q96C03 454 aa15.87■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF71Q9NQZ8 489 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 RP1L1Q8IWN7 2480 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-211ENST00000615061 IGLV3-12A0A075B6K2 115 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 ZNF860A6NHJ4 632 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 SYCE1LA8MT33 242 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 SLU7O95391 586 aaKnown RBP15.86■□□□□ 0.13
CBWD3-211ENST00000615061 NSA2O95478 260 aaKnown RBP15.86■□□□□ 0.13
CBWD3-211ENST00000615061 GFAPP14136 432 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 NR1D1P20393 614 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 AHRP35869 848 aa15.86■□□□□ 0.13
CBWD3-211ENST00000615061 EFNA3P52797 238 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms