RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 C12orf10Q9HB07 376 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 NLGN3Q9NZ94 848 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CBX4O00257 560 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PCDH17O14917 1159 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MBP02144 154 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 HDCP19113 662 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 BCL2L1Q07817 233 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 KCNJ11Q14654 390 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CADM2Q8N3J6 435 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 OR56B4Q8NH76 319 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 TYROBPO43914 113 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 MAD2L1BPQ15013 274 aaPredicted RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 OR5T3Q8NGG3 340 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 NPLOC4Q8TAT6 608 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 SAMD11Q96NU1 681 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 SLC19A3Q9BZV2 496 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 GLOD4Q9HC38 313 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZNF175Q9Y473 711 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 F5H5P2 479 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CYP17A1P05093 508 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 BCKDHAP12694 445 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 RFC2P35250 354 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 SCNN1AP37088 669 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MECP2P51608 486 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 MEF2DQ14814 521 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CD163Q86VB7 1156 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PTCHD1Q96NR3 888 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 KANSL3Q9P2N6 904 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PRELID3BQ9Y3B1 194 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 A0A075B6Q4 140 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 TLR5O60602 858 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PTPN9P43378 593 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 RARRES1P49788 294 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 LAMTOR4Q0VGL1 99 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PRSS55Q6UWB4 352 aaPredicted RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZNF565Q8N9K5 539 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ATP6V1C2Q8NEY4 427 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CORO2AQ92828 525 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 RERGQ96A58 199 aaPredicted RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 TMED9Q9BVK6 235 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 YIPF2Q9BWQ6 316 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZFR2Q9UPR6 939 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 UGT2A1Q9Y4X1 527 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CNTNAP4Q9C0A0 1308 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 KIAA0100Q14667 2235 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 PIP5K1BO14986 540 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 NKRFO15226 690 aaKnown RBP eCLIP8.53□□□□□ -1.04
TTC28-208ENST00000612946 RBBP9O75884 186 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 LALBAP00709 142 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PRKCHP24723 683 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MSANTD2Q6P1R3 559 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 TMEM205Q6UW68 189 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 KLHL9Q9P2J3 617 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 OR10H1Q9Y4A9 318 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MT-CO2P00403 227 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 RETP07949 1114 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PTPN2P17706 415 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 SNRPD1P62314 119 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 SCARF1Q14162 830 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MFSD14CQ5VZR4 134 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 TFAP2CQ92754 450 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 P2RX2Q9UBL9 471 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 TVP23AA6NH52 213 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ZNF670-ZNF695F2Z2N8 137 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 HCRTR2O43614 444 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 ADAP00813 363 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PTGER3P43115 390 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CAMLGP49069 296 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 EFEMP1Q12805 493 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 MPPE1Q53F39 396 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
TTC28-208ENST00000612946 TXNRD3Q86VQ6 643 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 COMTD1Q86VU5 262 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 CRYBG2Q8N1P7 616 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 OR6J1Q8NGC5 347 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PEX13Q92968 403 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 PORCNQ9H237 461 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 AAASQ9NRG9 546 aa8.53□□□□□ -1.04
TTC28-208ENST00000612946 A0A1W2PPL8 197 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 GPR182O15218 404 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 ZNF20P17024 532 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 RNASE12Q5GAN4 147 aaKnown RBP8.52□□□□□ -1.04
TTC28-208ENST00000612946 SP8Q8IXZ3 490 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 SLC25A51Q9H1U9 297 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 LIN7BQ9HAP6 207 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 AGPAT4Q9NRZ5 378 aa8.52□□□□□ -1.04
TTC28-208ENST00000612946 TGM4P49221 684 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 BAMBIQ13145 260 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 BTN1A1Q13410 526 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 SNTB2Q13425 540 aaKnown RBP8.52□□□□□ -1.05
TTC28-208ENST00000612946 RAPSNQ13702 412 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 ABRAXAS2Q15018 415 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 EID2Q8N6I1 236 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 CCDC54Q8NEL0 328 aa8.52□□□□□ -1.05
TTC28-208ENST00000612946 MRPS31Q92665 395 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms