RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MGAT1P26572 445 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 IMPA1P29218 277 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 CLCN7P51798 805 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 CUL1Q13616 776 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 PTK6Q13882 451 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 USP10Q14694 798 aaKnown RBP22.03■■□□□ 1.12
MMP28-203ENST00000612672 NDUFA9Q16795 377 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 SLC25A25Q6KCM7 469 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 CENPUQ71F23 418 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 GHDCQ8N2G8 530 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 TMEM178AQ8NBL3 297 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 KCT2Q8NC54 265 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 VKORC1Q9BQB6 163 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 PPT2Q9UMR5 302 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 AKAP6Q13023 2319 aa22.03■■□□□ 1.12
MMP28-203ENST00000612672 ZNF860A6NHJ4 632 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 DNAJB6O75190 326 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 ESR1P03372 595 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 CYC1P08574 325 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 COILP38432 576 aaPredicted RBP22.02■■□□□ 1.12
MMP28-203ENST00000612672 NR0B1P51843 470 aaKnown RBP22.02■■□□□ 1.12
MMP28-203ENST00000612672 ABATP80404 500 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 OC90Q02509 493 aaPredicted RBP22.02■■□□□ 1.12
MMP28-203ENST00000612672 EXT1Q16394 746 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 OR5T3Q8NGG3 340 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 PANX2Q96RD6 677 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 KIFC1Q9BW19 673 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 CDCP1Q9H5V8 836 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 FAM114A2Q9NRY5 505 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 LRFN1Q9P244 771 aa22.02■■□□□ 1.12
MMP28-203ENST00000612672 ZNF407Q9C0G0 2248 aa22.02■■□□□ 1.11
MMP28-203ENST00000612672 NME2P1O60361 137 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 SYF2O95926 243 aaKnown RBP22.01■■□□□ 1.11
MMP28-203ENST00000612672 NME2P22392 152 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 SLC26A5P58743 744 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 TFF3Q07654 80 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 ABRAXAS2Q15018 415 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 SIX1Q15475 284 aaPredicted RBP22.01■■□□□ 1.11
MMP28-203ENST00000612672 CA5BP1Q8WTZ4 195 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 NRGNQ92686 78 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 TM4SF19Q96DZ7 209 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 IL22Q9GZX6 179 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 EIF2B3Q9NR50 452 aaKnown RBP22.01■■□□□ 1.11
MMP28-203ENST00000612672 PAK5Q9P286 719 aa22.01■■□□□ 1.11
MMP28-203ENST00000612672 PRRC2AP48634 2157 aaKnown RBP22.01■■□□□ 1.11
MMP28-203ENST00000612672 TCRBV7S3A2A0A539 114 aa22■■□□□ 1.11
MMP28-203ENST00000612672 FEZF1A0PJY2 475 aa22■■□□□ 1.11
MMP28-203ENST00000612672 NKX2-6A6NCS4 301 aa22■■□□□ 1.11
MMP28-203ENST00000612672 LCMT2O60294 686 aaKnown RBP22■■□□□ 1.11
MMP28-203ENST00000612672 SLC25A12O75746 678 aa22■■□□□ 1.11
MMP28-203ENST00000612672 MLYCDO95822 493 aa22■■□□□ 1.11
MMP28-203ENST00000612672 TSPAN12O95859 305 aa22■■□□□ 1.11
MMP28-203ENST00000612672 ZNF24P17028 368 aa22■■□□□ 1.11
MMP28-203ENST00000612672 TPP2P29144 1249 aaPredicted RBP22■■□□□ 1.11
MMP28-203ENST00000612672 RFC3P40938 356 aa22■■□□□ 1.11
MMP28-203ENST00000612672 AGTR2P50052 363 aa22■■□□□ 1.11
MMP28-203ENST00000612672 ADARP55265 1226 aaKnown RBP22■■□□□ 1.11
MMP28-203ENST00000612672 MAPKAPK3Q16644 382 aa22■■□□□ 1.11
MMP28-203ENST00000612672 CYHR1Q6ZMK1 362 aa22■■□□□ 1.11
MMP28-203ENST00000612672 PCGF5Q86SE9 256 aa22■■□□□ 1.11
MMP28-203ENST00000612672 RPRMLQ8N4K4 120 aa22■■□□□ 1.11
MMP28-203ENST00000612672 FBXO15Q8NCQ5 510 aaPredicted RBP22■■□□□ 1.11
MMP28-203ENST00000612672 ELP5Q8TE02 316 aa22■■□□□ 1.11
MMP28-203ENST00000612672 PEX11GQ96HA9 241 aa22■■□□□ 1.11
MMP28-203ENST00000612672 TRIM5Q9C035 493 aa22■■□□□ 1.11
MMP28-203ENST00000612672 UTP6Q9NYH9 597 aaKnown RBP22■■□□□ 1.11
MMP28-203ENST00000612672 PHF3Q92576 2039 aaKnown RBP22■■□□□ 1.11
MMP28-203ENST00000612672 DNAJC13O75165 2243 aa22■■□□□ 1.11
MMP28-203ENST00000612672 KCNE1BA0A087WTH5 132 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 B3GALT4O96024 378 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 HSD17B2P37059 387 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 SKIV2L2P42285 1042 aaKnown RBP21.99■■□□□ 1.11
MMP28-203ENST00000612672 THEMIS2Q5TEJ8 643 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 MRNIPQ6NTE8 343 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 ZNF549Q6P9A3 640 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 CD163Q86VB7 1156 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 SLC13A5Q86YT5 568 aaPredicted RBP21.99■■□□□ 1.11
MMP28-203ENST00000612672 SLC5A8Q8N695 610 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 PRELID2Q8N945 189 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 PLPP5Q8NEB5 264 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 ASB11Q8WXH4 323 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 NAALAD2Q9Y3Q0 740 aa21.99■■□□□ 1.11
MMP28-203ENST00000612672 H3BMM5 538 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 GFYI3L273 518 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 ART1P52961 327 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 RPS15AP62244 130 aaKnown RBP21.98■■□□□ 1.11
MMP28-203ENST00000612672 TBPL1P62380 186 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 NSDHLQ15738 373 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 RNF187Q5TA31 235 aaPredicted RBP21.98■■□□□ 1.11
MMP28-203ENST00000612672 MBOAT1Q6ZNC8 495 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 SDCCAG8Q86SQ7 713 aaPredicted RBP21.98■■□□□ 1.11
MMP28-203ENST00000612672 SLC26A11Q86WA9 606 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 CILP2Q8IUL8 1156 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 CCDC89Q8N998 374 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 LPAR4Q99677 370 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 OLFM1Q99784 485 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 DESI2Q9BSY9 194 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 UCK2Q9BZX2 261 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 TMEM184CQ9NVA4 438 aa21.98■■□□□ 1.11
MMP28-203ENST00000612672 TNFRSF10DQ9UBN6 386 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms