RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 RAPSNQ13702 412 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 FNDC8Q8TC99 324 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 IPCEF1Q8WWN9 437 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 TCEAL4Q96EI5 215 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ZNF347Q96SE7 839 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 POLR2J3Q9H1A7 115 aaKnown RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 REEP4Q9H6H4 257 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ABCB10Q9NRK6 738 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 IL36AQ9UHA7 158 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 OR51B4Q9Y5P0 310 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 E7EQ34 232 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 OR1F1O43749 312 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 FOXD2O60548 495 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 C6orf47O95873 294 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 PFKLP17858 780 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 VIPR2P41587 438 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 STT3AP46977 705 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 CLCNKAP51800 687 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ZNF846Q147U1 533 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 NCF4Q15080 339 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 GGTA1PQ4G0N0 100 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 C9orf64Q5T6V5 341 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 COMMD6Q7Z4G1 85 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 COL26A1Q96A83 441 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ZBED6CLQ96FA7 236 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 COL21A1Q96P44 957 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 RAD9AQ99638 391 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 C19orf43Q9BQ61 176 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 CPPED1Q9BRF8 314 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 IKZF5Q9H5V7 419 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 MAGIXQ9H6Y5 334 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 WDR26Q9H7D7 661 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 A0A1B0GVG6 124 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 CACNB4O00305 520 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 SLC1A7O00341 560 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 PLK4O00444 970 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 PDPK1O15530 556 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 CCNB2O95067 398 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 GADD45GO95257 159 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 VNN2O95498 520 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 KRT8P05787 483 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 KLK1P06870 262 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 SYN1P17600 705 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 UGT2B15P54855 530 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 LIPIQ6XZB0 460 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 OOSP2Q86WS3 158 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ZNF614Q8N883 585 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 VANGL1Q8TAA9 524 aaPredicted RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 ZNF480Q8WV37 535 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 FCGR1BQ92637 280 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ITFG2Q969R8 447 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 FEVQ99581 238 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 INPP5KQ9BT40 448 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 FNDC11Q9BVV2 318 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 C1QTNF7Q9BXJ2 289 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 TRIT1Q9H3H1 467 aaKnown RBP6.15□□□□□ -1.42
SNX13-213ENST00000611725 CLN6Q9NWW5 311 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 ASIC5Q9NY37 505 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 GPRC5BQ9NZH0 403 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 CCL26Q9Y258 94 aa6.15□□□□□ -1.42
SNX13-213ENST00000611725 SCN1AP35498 2009 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 FAM186AA6NE01 2351 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 ATAD5Q96QE3 1844 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 VILLO15195 856 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 CD36P16671 472 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 BUD31P41223 144 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 ALDH6A1Q02252 535 aaKnown RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 NPRL3Q12980 569 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 TYW3Q6IPR3 259 aaKnown RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 PSRC1Q6PGN9 363 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 PTCHD4Q6ZW05 846 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 NEK10Q6ZWH5 1172 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 GPR149Q86SP6 731 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 C12orf76Q8N812 135 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 CHDHQ8NE62 594 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 DOHHQ9BU89 302 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 KLHL25Q9H0H3 589 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 CDH7Q9ULB5 785 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 KLHL20Q9Y2M5 609 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 EDDM13A0A1B0GTR0 161 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 LINC00854A0A1B0GVQ3 168 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 KRT87PA6NCN2 255 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 H3BMQ9 156 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 BCAS1O75363 584 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 WISP3O95389 354 aaPredicted RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 GPX2P18283 190 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 BMPR1AP36894 532 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 DSTNP60981 165 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 RPP38P78345 283 aaKnown RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 TAP2Q03519 686 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 KRR1Q13601 381 aaKnown RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 ARMC4Q5T2S8 1044 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 CPZQ66K79 652 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 FAM92BQ6ZTR7 304 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 ERN2Q76MJ5 926 aaKnown RBP6.15□□□□□ -1.43
SNX13-213ENST00000611725 SERPINA11Q86U17 422 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 LRRTM4Q86VH4 590 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 COG8Q96MW5 612 aa6.15□□□□□ -1.43
SNX13-213ENST00000611725 PKP4Q99569 1192 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms