RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 MYNNQ9NPC7 610 aa11.5□□□□□ -0.57
USP6NL-206ENST00000609853 PAPOLBQ9NRJ5 636 aaKnown RBP11.5□□□□□ -0.57
USP6NL-206ENST00000609853 PHPT1Q9NRX4 125 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-206ENST00000609853 IFT80Q9P2H3 777 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-206ENST00000609853 CIDEBQ9UHD4 219 aa11.5□□□□□ -0.57
USP6NL-206ENST00000609853 VPS4AQ9UN37 437 aa11.5□□□□□ -0.57
USP6NL-206ENST00000609853 TMEM98Q9Y2Y6 226 aa11.5□□□□□ -0.57
USP6NL-206ENST00000609853 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SEMA3DO95025 777 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PCCBP05166 539 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 THRBP10828 461 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 MYCLP1P12525 358 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 LAMP2P13473 410 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 GDI1P31150 447 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PBX2P40425 430 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 RXRGP48443 463 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ALDH3B2P48448 385 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 RPS21P63220 83 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PDE7AQ13946 482 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 TEAD4Q15561 434 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 OTUD3Q5T2D3 398 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 NAIF1Q69YI7 327 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 KIAA1161Q6NSJ0 714 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 TMEM214Q6NUQ4 689 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SLC30A9Q6PML9 568 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 COMMD6Q7Z4G1 85 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C17orf64Q86WR6 236 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 HDDC3Q8N4P3 179 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 FAM86B1Q8N7N1 296 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ZNF513Q8N8E2 541 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PJA1Q8NG27 643 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 CDC26Q8NHZ8 85 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C1QTNF7Q9BXJ2 289 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PLA2G2FQ9BZM2 168 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 GRIP2Q9C0E4 1043 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 RHBGQ9H310 441 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 WDR26Q9H7D7 661 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 CARS2Q9HA77 564 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C1orf226A1L170 272 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PLOD2O00469 737 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 DPM1O60762 260 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 CPSF4O95639 269 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SNAP29O95721 258 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 GNAO1P09471 354 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SLC35G4P0C7Q5 338 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 KDELR2P33947 212 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 GSTM5P46439 218 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 RPS6KA3P51812 740 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 PPP2R2BQ00005 443 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 TSTA3Q13630 321 aaPredicted RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ELOAQ14241 798 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 NKG7Q16617 165 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 HKDC1Q2TB90 917 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ZC3H12BQ5HYM0 836 aaKnown RBP11.49□□□□□ -0.57
USP6NL-206ENST00000609853 TBPL2Q6SJ96 375 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 FAM129CQ86XR2 697 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ZZZ3Q8IYH5 903 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SYNPOQ8N3V7 929 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 METTL25Q8N6Q8 603 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 GPR156Q8NFN8 814 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 OR5AR1Q8NGP9 310 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SMPDL3AQ92484 453 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 FAM131CQ96AQ9 280 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SH3KBP1Q96B97 665 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 CHFRQ96EP1 664 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 MYADMQ96S97 322 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 AIF1LQ9BQI0 150 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 TIMM29Q9BSF4 260 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C1QTNF2Q9BXJ5 285 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 NKX2-4Q9H2Z4 354 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 RAD21L1Q9H4I0 556 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 SLC28A3Q9HAS3 691 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 IL1RAPQ9NPH3 570 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 WASH6PQ9NQA3 447 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C3orf18Q9UK00 162 aa11.49□□□□□ -0.57
USP6NL-206ENST00000609853 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 TTKP33981 857 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ARHGDIAP52565 204 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ESRRGP62508 458 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 SGCGQ13326 291 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 CCNYL2Q5T2Q4 361 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 RBM44Q6ZP01 1051 aaKnown RBP11.48□□□□□ -0.57
USP6NL-206ENST00000609853 CBLL1Q75N03 491 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 MTSS1LQ765P7 747 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 EIF3MQ7L2H7 374 aaKnown RBP11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ARMCX6Q7L4S7 300 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 CLECL1Q8IZS7 167 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 C10orf111Q8N326 155 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ABHD11Q8NFV4 315 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 ZFP90Q8TF47 636 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 NRBF2Q96F24 287 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 QRFPRQ96P65 431 aa11.48□□□□□ -0.57
USP6NL-206ENST00000609853 KXD1Q9BQD3 176 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms