RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 REEP5Q00765 189 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 RGS1Q08116 209 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 IL10RAQ13651 578 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 E2F2Q14209 437 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 HERC3Q15034 1050 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 RASA2Q15283 850 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 TBCCQ15814 346 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 PDK4Q16654 411 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 WDR93Q6P2C0 686 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 SLCO4C1Q6ZQN7 724 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 TMPRSS11BQ86T26 416 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 UHMK1Q8TAS1 419 aaKnown RBP13.58□□□□□ -0.24
HDDC2-209ENST00000609477 NT5CQ8TCD5 201 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 ACMSDQ8TDX5 336 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 WDR34Q96EX3 536 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 EFCAB11Q9BUY7 163 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 SYNPO2LQ9H987 977 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 MKKSQ9NPJ1 570 aaPredicted RBP13.58□□□□□ -0.24
HDDC2-209ENST00000609477 C14orf105Q9NVL8 296 aa13.58□□□□□ -0.24
HDDC2-209ENST00000609477 PSMC3IPQ9P2W1 217 aaPredicted RBP13.58□□□□□ -0.24
HDDC2-209ENST00000609477 SUPT3HB4E1H0 165 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 K7EPI3 171 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 P2RX6O15547 441 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 FOXS1O43638 330 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SUPT3HO75486 399 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 TUBBP07437 444 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SERPINA6P08185 405 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 FURINP09958 794 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 MYBL2P10244 700 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 IL10P22301 178 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 MMP11P24347 488 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 GCAP28676 217 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 OR1D4P47884 311 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 PIK3CGP48736 1102 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 HSPA7P48741 367 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 POLE2P56282 527 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 NFKB2Q00653 900 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 IRF9Q00978 393 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SLC9A5Q14940 896 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SETDB1Q15047 1291 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 PAGE2BQ5JRK9 111 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 TMIGD1Q6UXZ0 262 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 COX15Q7KZN9 410 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 UBE2E3Q969T4 207 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
HDDC2-209ENST00000609477 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
HDDC2-209ENST00000609477 FER1L6-AS2Q96M78 137 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 BBC3Q96PG8 261 aaPredicted RBP13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SPSB2Q99619 263 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 MRPL57Q9BQC6 102 aaKnown RBP13.57□□□□□ -0.24
HDDC2-209ENST00000609477 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 ANKHQ9HCJ1 492 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 SEMA3GQ9NS98 782 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 OPTCQ9UBM4 332 aa13.57□□□□□ -0.24
HDDC2-209ENST00000609477 UBXN8O00124 270 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 PEX12O00623 359 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 NDUFS4O43181 175 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 CCNT2O60583 730 aaKnown RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 KLHL41O60662 606 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 CNOT3O75175 753 aaKnown RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 RFPL1O75677 317 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 MED26O95402 600 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 ZGLP1P0C6A0 271 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 GFAPP14136 432 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 EPB42P16452 691 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 GLRBP48167 497 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 MEF2AQ02078 507 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 KCNAB2Q13303 367 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 NAA30Q147X3 362 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 HIST2H2ACQ16777 129 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 C18orf21Q32NC0 220 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 TECRLQ5HYJ1 363 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 ATP1A1-AS1Q5TC04 95 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 HIST2H2AA3Q6FI13 130 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 EMBQ6PCB8 327 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 ABHD13Q7L211 337 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 TDRPQ86YL5 185 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 AFAP1L2Q8N4X5 818 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 STT3BQ8TCJ2 826 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 UBLCP1Q8WVY7 318 aaPredicted RBP13.56□□□□□ -0.24
HDDC2-209ENST00000609477 MIEF2Q96C03 454 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
HDDC2-209ENST00000609477 KALRNO60229 2985 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 A0A0A6YYC8 382 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-209ENST00000609477 MKRN2OSH3BPM6 223 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 STX16-NPEPL1H3BU86 382 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 I3L1I5 382 aaPredicted RBP13.55□□□□□ -0.24
HDDC2-209ENST00000609477 STX16O14662 325 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 UGDHO60701 494 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 CLEC3AO75596 197 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 WFS1O76024 890 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 UMODP07911 640 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 GSTA1P08263 222 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 ALOX12P18054 663 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 SERPINB1P30740 379 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
HDDC2-209ENST00000609477 IRF8Q02556 426 aa13.55□□□□□ -0.24
HDDC2-209ENST00000609477 RBBP5Q15291 538 aaKnown RBP13.55□□□□□ -0.24
HDDC2-209ENST00000609477 PFKFB4Q16877 469 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms