RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 MST1P26927 711 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 GRK3P35626 688 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 XCR1P46094 333 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 AGTR2P50052 363 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 CCR8P51685 355 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PGGT1BP53609 377 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PER3P56645 1201 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 KCNK10P57789 538 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 MEF2AQ02078 507 aaPredicted RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 ZRSR2Q15696 482 aaKnown RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 INAQ16352 499 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 BTBD16Q32M84 506 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 BBS9Q3SYG4 887 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 MINDY4Q4G0A6 757 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HP1BP3Q5SSJ5 553 aaPredicted RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 MFSD4BQ5TF39 518 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HECTD2Q5U5R9 776 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 DUPD1Q68J44 220 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HIBCHQ6NVY1 386 aaPredicted RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 H3F3CQ6NXT2 135 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 KIAA0408Q6ZU52 694 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 LANCL3Q6ZV70 420 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ANKRD37Q7Z713 158 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ASPGQ86U10 573 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 FJX1Q86VR8 437 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PDSS2Q86YH6 399 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 MFSD9Q8NBP5 474 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PLPP5Q8NEB5 264 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 OR56A3Q8NH54 315 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 DNAJB8Q8NHS0 232 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SUN3Q8TAQ9 357 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 NR4A3Q92570 626 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 RELTQ969Z4 430 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PYCR2Q96C36 320 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 MOCOSQ96EN8 888 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 CERS2Q96G23 380 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SNF8Q96H20 258 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HIST1H2AHQ96KK5 128 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PWWP2AQ96N64 755 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 OR4K3Q96R72 315 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HIST1H2AJQ99878 128 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HAUS8Q9BT25 410 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 H2AFJQ9BTM1 129 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SARGQ9BW04 601 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 DDX47Q9H0S4 455 aaKnown RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 PLAC1Q9HBJ0 212 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ANKHQ9HCJ1 492 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 PPANQ9NQ55 473 aaKnown RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 TRMT1Q9NXH9 659 aaKnown RBP7.19□□□□□ -1.26
CUX1-219ENST00000606749 ARL15Q9NXU5 204 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 HCN3Q9P1Z3 774 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ABI3Q9P2A4 366 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 ASIC3Q9UHC3 531 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 TEKT2Q9UIF3 430 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 VWA7Q9Y334 891 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 NAALAD2Q9Y3Q0 740 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SLC22A7Q9Y694 548 aa7.19□□□□□ -1.26
CUX1-219ENST00000606749 SCN2AQ99250 2005 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 SPTAN1Q13813 2472 aaKnown RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 TRBC2A0A5B9 178 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 OR1F1O43749 312 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 PRAMEF2O60811 474 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 RDH16O75452 317 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 WISP2O76076 250 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 GUCA1CO95843 209 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 CRYABP02511 175 aaKnown RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 UQCRHP07919 91 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 SLC35G6P0C7Q6 338 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 IL10P22301 178 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 CD96P40200 585 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 ELK3P41970 407 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 AP1S2P56377 157 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 RHAGQ02094 409 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 ZNF33BQ06732 778 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 ACTN3Q08043 901 aaPredicted RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 PDAP1Q13442 181 aaKnown RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 PWP1Q13610 501 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 MORF4L2Q15014 288 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 HERC3Q15034 1050 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 NSDHLQ15738 373 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 EXT1Q16394 746 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 ACER2Q5QJU3 275 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 CATSPEREQ5SY80 951 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 C1QL3Q5VWW1 255 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 FCRLBQ6BAA4 426 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 SP5Q6BEB4 398 aaPredicted RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 TRMT10BQ6PF06 316 aaKnown RBP7.18□□□□□ -1.26
CUX1-219ENST00000606749 TMEM207Q6UWW9 146 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 GFRALQ6UXV0 394 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 STRA8Q7Z7C7 330 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 SLC34A3Q8N130 599 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 AFAP1L2Q8N4X5 818 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 GPATCH11Q8N954 259 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 ZNF740Q8NDX6 193 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 OR5T3Q8NGG3 340 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 ZCCHC10Q8TBK6 192 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 M1APQ8TC57 530 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 FBXL8Q96CD0 374 aa7.18□□□□□ -1.26
CUX1-219ENST00000606749 PEX11GQ96HA9 241 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms