RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, human

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-225	ENST00000606671	COL5A3	P25940	1745 aa	Predicted RBP	3.58	□□□□□ -1.84
ZEB1-225	ENST00000606671	NRXN2	Q9P2S2	1712 aa		3.58	□□□□□ -1.84
ZEB1-225	ENST00000606671	TRIOBP	Q9H2D6	2365 aa		3.58	□□□□□ -1.84
ZEB1-225	ENST00000606671	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	ANXA2P2	A6NMY6	339 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	C2orf81	A6NN90	581 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	CEP290	O15078	2479 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	ROCK2	O75116	1388 aa	Known RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	ATP6AP2	O75787	350 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	DFFB	O76075	338 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	PAK4	O96013	591 aa	Predicted RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	EDN1	P05305	212 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	FAM157C	P0CG43	387 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	CEACAM1	P13688	526 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	DARS	P14868	501 aa	Known RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	CDC25C	P30307	473 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	RPL21	P46778	160 aa	Known RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	NR0B1	P51843	470 aa	Known RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	TFCP2	Q12800	502 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	PHKG1	Q16816	387 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	LACTB2	Q53H82	288 aa	Predicted RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	LBH	Q53QV2	105 aa	Predicted RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	C20orf194	Q5TEA3	1177 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	ZNF449	Q6P9G9	518 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	IL17REL	Q6ZVW7	336 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	ADCK2	Q7Z695	626 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	THNSL1	Q8IYQ7	743 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	CARMIL3	Q8ND23	1372 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	KCNE4	Q8WWG9	221 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	PROX1	Q92786	737 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	LGALS12	Q96DT0	336 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	GIMAP5	Q96F15	307 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	RAB3IP	Q96QF0	476 aa	Predicted RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	MGME1	Q9BQP7	344 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	PRRG4	Q9BZD6	226 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	VPS33B	Q9H267	617 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	CPVL	Q9H3G5	476 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	FN3K	Q9H479	309 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	TRPV4	Q9HBA0	871 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	SCRT2	Q9NQ03	307 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	TNN	Q9UQP3	1299 aa		3.57	□□□□□ -1.84
ZEB1-225	ENST00000606671	KIAA0100	Q14667	2235 aa	Known RBP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	ADAMTS7	Q9UKP4	1686 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	HHLA1	C9JL84	531 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	EML2	O95834	649 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	IFNAR1	P17181	557 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	ACAT1	P24752	427 aa	Known RBP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	CSTF2	P33240	577 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	DEK	P35659	375 aa	Known RBP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	GP5	P40197	560 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	PRKCI	P41743	596 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	EPS15	P42566	896 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	MAGEA11	P43364	429 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	ALDH3A2	P51648	485 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	VAMP7	P51809	220 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	CRIP2	P52943	208 aa	Predicted RBP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	GSDMD	P57764	484 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	DLK1	P80370	383 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	PPARD	Q03181	441 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	KLC1	Q07866	573 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	RASGEF1B	Q0VAM2	473 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	SPECC1	Q5M775	1068 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	C6orf136	Q5SQH8	315 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	PRR5L	Q6MZQ0	368 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	ARHGAP11A	Q6P4F7	1023 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	NOTCH2NL	Q7Z3S9	236 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	ABI3BP	Q7Z7G0	1075 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	KIRREL3	Q8IZU9	778 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	KLHDC1	Q8N7A1	406 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	RASGEF1A	Q8N9B8	481 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	DUX3	Q96PT4	197 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	EGFL8	Q99944	293 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	PIGQ	Q9BRB3	760 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	XAB2	Q9HCS7	855 aa	Known RBP	3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	PFDN4	Q9NQP4	134 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	C2orf42	Q9NWW7	574 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	TXNDC16	Q9P2K2	825 aa		3.56	□□□□□ -1.84
ZEB1-225	ENST00000606671	RAB3GAP2	Q9H2M9	1393 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	HEG1	Q9ULI3	1381 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	CDHR2	Q9BYE9	1310 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	MKI67	P46013	3256 aa	Known RBP	3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	CCL24	O00175	119 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	SNX3	O60493	162 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	ZG16	O60844	167 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	CDC123	O75794	336 aa	Predicted RBP	3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	AP2A2	O94973	939 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	GLUL	P15104	373 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	PDGFRA	P16234	1089 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	MT3	P25713	68 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	KRTAP10-9	P60411	292 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	HERV-K104	P61576	105 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	KCNJ10	P78508	379 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	SP3	Q02447	781 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	HYAL1	Q12794	435 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	PTGIS	Q16647	500 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	CTU2	Q2VPK5	515 aa	Known RBP	3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	TMEM30B	Q3MIR4	351 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	XKR6	Q5GH73	641 aa		3.55	□□□□□ -1.84
ZEB1-225	ENST00000606671	SLC35D3	Q5M8T2	416 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms