RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CPAMD8Q8IZJ3 1885 aa11.04□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ARHGEF33A8MVX0 844 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PEX1O43933 1283 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CCNDBP1O95273 360 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 INHBBP09529 407 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ERGP11308 486 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TRHRP34981 398 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PPARGP37231 505 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 BCL6P41182 706 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KIR2DL3P43628 341 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HLCSP50747 726 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRAMEP78395 509 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PRDX1Q06830 199 aaKnown RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 AARS2Q5JTZ9 985 aaKnown RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TSTD2Q5T7W7 516 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PAMR1Q6UXH9 720 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CAMKMTQ7Z624 323 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CDC20BQ86Y33 519 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ACRBPQ8NEB7 543 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR52N2Q8NGI0 321 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR9A1PQ8NGU1 263 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 GOT1L1Q8NHS2 421 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ELP5Q8TE02 316 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ARSGQ96EG1 525 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MRFAP1L1Q96HT8 127 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZNF778Q96MU6 729 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PANX3Q96QZ0 392 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CHP1Q99653 195 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MACROD1Q9BQ69 325 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TRIM45Q9H8W5 580 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZNHIT6Q9NWK9 470 aaKnown RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MARCH4Q9P2E8 410 aaPredicted RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SNRNP200O75643 2136 aaKnown RBP11.03□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FBN1P35555 2871 aaKnown RBP11.02□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MAGEB17A8MXT2 336 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NPIPA2E9PIF3 369 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NPIPA3F8WFD2 350 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 KLRC4-KLRK1H3BQV0 150 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CDK2AP1O14519 115 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 KPNA5O15131 536 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RDH16O75452 317 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 HEXAP06865 529 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 OR4D2P58180 307 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MLF1P58340 268 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GPR85P60893 370 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TPM4P67936 248 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RHAGQ02094 409 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 DEFB113Q30KQ7 82 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 P3H1Q32P28 736 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ANKRD20A4Q4UJ75 823 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 VN1R4Q7Z5H5 301 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LUZP1Q86V48 1076 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZFP62Q8NB50 900 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PPFIBP2Q8ND30 876 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 OR5M9Q8NGP3 310 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 C16orf52Q8NHV5 167 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZCCHC10Q8TBK6 192 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 OSBPL8Q9BZF1 889 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 DEFB127Q9H1M4 99 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 P2RY12Q9H244 342 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PNPLA3Q9NST1 481 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CATSPERZQ9NTU4 200 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CRIM1Q9NZV1 1036 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 IFNKQ9P0W0 207 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MXRA5Q9NR99 2828 aa11.02□□□□□ -0.65
PDLIM1P1-201ENST00000604187 INTS1Q8N201 2190 aaKnown RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF860A6NHJ4 632 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FAM166BA8MTA8 275 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MYO1CO00159 1063 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 SMAPO00193 183 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ATE1O95260 518 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 MATN4O95460 622 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GAS8O95995 478 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ACVR2AP27037 513 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TTPAP49638 278 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PNLIPRP1P54315 467 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 COPS2P61201 443 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ABATP80404 500 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 RELAQ04206 551 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ACVR1Q04771 509 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 CDH17Q12864 832 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ARHGAP19Q14CB8 494 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 GXYLT1Q4G148 440 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 ZNF585AQ6P3V2 769 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 WDR53Q7Z5U6 358 aaPredicted RBP11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PCGF5Q86SE9 256 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LINC00523Q86TU6 105 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 PDSS2Q86YH6 399 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LIX1LQ8IVB5 337 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 LRRN4CLQ8ND94 238 aa11.01□□□□□ -0.65
PDLIM1P1-201ENST00000604187 FAM136AQ96C01 138 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms