RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RSC1A1Q92681 617 aa16.65■□□□□ 0.26
PPFIA3-207ENST00000602716 TWSG1Q9GZX9 223 aa16.65■□□□□ 0.26
PPFIA3-207ENST00000602716 COPS7BQ9H9Q2 264 aaPredicted RBP16.65■□□□□ 0.26
PPFIA3-207ENST00000602716 OR6C2Q9NZP2 312 aa16.65■□□□□ 0.26
PPFIA3-207ENST00000602716 OR5K4A6NMS3 321 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 MAGEB17A8MXT2 336 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 ISM1B1AKI9 464 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 TRIM38O00635 465 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 SMIM18P0DKX4 95 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 RPL38P63173 70 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 ZNF528Q3MIS6 628 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 RFTN2Q52LD8 501 aaPredicted RBP16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 KIAA1614Q5VZ46 1190 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 RNF165Q6ZSG1 346 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 TMEM26Q6ZUK4 368 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 ZNF438Q7Z4V0 828 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 GATAD2AQ86YP4 633 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 ABHD11Q8NFV4 315 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 HUS1BQ8NHY5 278 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 MRPL1Q9BYD6 325 aaKnown RBP16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 EHD1Q9H4M9 534 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 Q9H521 79 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 MRGBPQ9NV56 204 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 EVA1BQ9NVM1 165 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 PCDHB11Q9Y5F2 797 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 PCDHGA7Q9Y5G6 932 aa16.64■□□□□ 0.25
PPFIA3-207ENST00000602716 ANXA6P08133 673 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 CSNK1G2P78368 415 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 REEP5Q00765 189 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 PRDX1Q06830 199 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 SQLEQ14534 574 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 SF1Q15637 639 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 AP5B1Q2VPB7 878 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 OGFOD2Q6N063 350 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 SLC9B2Q86UD5 537 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 ANKRD53Q8N9V6 530 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 FNDC5Q8NAU1 212 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 PKP2Q99959 881 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 EFCAB11Q9BUY7 163 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 KLHL25Q9H0H3 589 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 ERVMER34-1Q9H9K5 563 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 RIC8BQ9NVN3 520 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 UBAP1Q9NZ09 502 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 SUSD2Q9UGT4 822 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 POLR3HQ9Y535 204 aaPredicted RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 R4GN57 208 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 GSAPA4D1B5 854 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 CASC3O15234 703 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 STATHP02808 62 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 TYRP1P17643 537 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 LSSP48449 732 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 PSME3P61289 254 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 CYP4F2P78329 520 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 IMPG1Q17R60 797 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 ATP6AP1LQ52LC2 224 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 ADCK2Q7Z695 626 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 LAS2Q8IYD9 372 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 NUDT8Q8WV74 236 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 APIPQ96GX9 242 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 OR2A14Q96R47 310 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 PCBD2Q9H0N5 130 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 PELI2Q9HAT8 420 aa16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 MRPS30Q9NP92 439 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-207ENST00000602716 SLC28A1O00337 649 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 HAT1O14929 419 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 TBX6O95947 436 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 SLC2A4P14672 509 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 UGT2B7P16662 529 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 EPHA8P29322 1005 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 RPS13P62277 151 aaKnown RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 STX5Q13190 355 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 MAPRE2Q15555 327 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 PAOXQ6QHF9 649 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 CHCHD4Q8N4Q1 142 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 TMEM102Q8N9M5 508 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 ASB9Q96DX5 294 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 TEX37Q96LM6 180 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 DPH7Q9BTV6 452 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 EPB41L1Q9H4G0 881 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 DMRT3Q9NQL9 472 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 AIG1Q9NVV5 245 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 ACTR10Q9NZ32 417 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 SUCOQ9UBS9 1254 aaKnown RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 PCDHGA11Q9Y5H2 935 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 FRYLO94915 3013 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 SMIM31A0A1B0GVY4 71 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 RGS14O43566 566 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 LCMT2O60294 686 aaKnown RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 PRAMEF10O60809 474 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 VPS4BO75351 444 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 FASLGP48023 281 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 CCR8P51685 355 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 CLCN2P51788 898 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 ATXN3P54252 364 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 ERVK-8P63133 956 aa16.62■□□□□ 0.25
PPFIA3-207ENST00000602716 HLA-BQ31612 363 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms