RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 VLDLRP98155 873 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 NFATC4Q14934 902 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 TRMT10BQ6PF06 316 aaKnown RBP8.46□□□□□ -1.05
CSMD1-216ENST00000602557 NCEH1Q6PIU2 408 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 NKD2Q969F2 451 aaPredicted RBP8.46□□□□□ -1.05
CSMD1-216ENST00000602557 ITPKCQ96DU7 683 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 POU2F3Q9UKI9 436 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 RPL36Q9Y3U8 105 aaKnown RBP8.46□□□□□ -1.05
CSMD1-216ENST00000602557 BHMG1C9JSJ3 638 aaPredicted RBP8.46□□□□□ -1.05
CSMD1-216ENST00000602557 SLURP2P0DP57 97 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 SSTR4P31391 388 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 KHKP50053 298 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 NFATC3Q12968 1075 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 KCNJ8Q15842 424 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 OR14C36Q8NHC7 312 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 LCN9Q8WX39 176 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC58Q96CX6 371 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 TM9SF3Q9HD45 589 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 NUP98P52948 1817 aa8.46□□□□□ -1.05
CSMD1-216ENST00000602557 RGPD5Q99666 1765 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MAGEB17A8MXT2 336 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 POLR1CO15160 346 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 ARHGEF15O94989 841 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 PPM1AP35813 382 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 NKX6-1P78426 367 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CHIT1Q13231 466 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MED27Q6P2C8 311 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CAND1Q86VP6 1230 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 COQ8BQ96D53 544 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF641Q96N77 438 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 RPF2Q9H7B2 306 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SIAEQ9HAT2 523 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 LYARQ9NX58 379 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CAPN14A8MX76 684 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 TP53P04637 393 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 BMXP51813 675 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 LGI4Q8N135 537 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 ARL5AQ9Y689 179 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 UNCXA6NJT0 531 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 LRRN3E7EW58 273 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 K7EPK0 472 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MSCO60682 206 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SLC51AQ86UW1 340 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SDR16C5Q8N3Y7 309 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 OR7D4Q8NG98 312 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 LRRN3Q9H3W5 708 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF696Q9H7X3 374 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 C14orf105Q9NVL8 296 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CD300AQ9UGN4 299 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 C3P01024 1663 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SOCS2O14508 198 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 WASP42768 502 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 STRADAQ7RTN6 431 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MCEMP1Q8IX19 187 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 STYXQ8WUJ0 223 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 NRG4Q8WWG1 115 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 C8orf48Q96LL4 319 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SLC25A51Q9H1U9 297 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 EVLQ9UI08 416 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 MED31Q9Y3C7 131 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 SMIM28A0A1B0GU29 152 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CIB4A0PJX0 185 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CDK14O94921 469 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CKMT1AP12532 417 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CBR1P16152 277 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 DNAJA1P31689 397 aaKnown RBP8.46□□□□□ -1.06
CSMD1-216ENST00000602557 DSC3Q14574 896 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 PTGR1Q14914 329 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CHST9Q7L1S5 443 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 DPPA2Q7Z7J5 298 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 IQCHQ86VS3 1027 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 CPNE9Q8IYJ1 553 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 TRIB2Q92519 343 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 ZNF416Q9BWM5 594 aa8.46□□□□□ -1.06
CSMD1-216ENST00000602557 KIAA0513O60268 411 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RASAL1O95294 804 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 CXCL14O95715 111 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ALDH3B1P43353 468 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 KLHL22Q53GT1 634 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 LHFPL3Q86UP9 236 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PRSS58Q8IYP2 241 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PRICKLE1Q96MT3 831 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 TTC34A8MYJ7 566 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 WDPCPO95876 746 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SEMG2Q02383 582 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 SNTA1Q13424 505 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 BIRC7Q96CA5 298 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 MIPEPQ99797 713 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 COMMD4Q9H0A8 199 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 DERAQ9Y315 318 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 ARHGEF17Q96PE2 2063 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 J3QLW9 94 aa8.45□□□□□ -1.06
CSMD1-216ENST00000602557 RPP14O95059 124 aaKnown RBP8.45□□□□□ -1.06
CSMD1-216ENST00000602557 PTTG1O95997 202 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms