RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SIRT5Q9NXA8 310 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 KLHL20Q9Y2M5 609 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 AP1M2Q9Y6Q5 423 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 PI4KAP42356 2102 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 A0A0J9YY10 115 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 CCDC154A6NI56 674 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 H0YHG0 523 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 GSC2O15499 205 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 SERPIND1P05546 499 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 ALPPL2P10696 532 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 MAGP20916 626 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 EPHA8P29322 1005 aaPredicted RBP17.23■□□□□ 0.35
VRK3-225ENST00000601912 CPOXP36551 454 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 PPM1FP49593 454 aaPredicted RBP17.23■□□□□ 0.35
VRK3-225ENST00000601912 RAP1GDS1P52306 607 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 CLNS1AP54105 237 aaKnown RBP17.23■□□□□ 0.35
VRK3-225ENST00000601912 SLC25A3Q00325 362 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 VPS26BQ4G0F5 336 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 REP15Q6BDI9 236 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 GALNT18Q6P9A2 607 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 FIGLAQ6QHK4 219 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 METTL4Q8N3J2 472 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 MFSD9Q8NBP5 474 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 RSC1A1Q92681 617 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 NPAS2Q99743 824 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 EBPLQ9BY08 206 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 CADM1Q9BY67 442 aaKnown RBP17.23■□□□□ 0.35
VRK3-225ENST00000601912 MMADHCQ9H3L0 296 aaPredicted RBP17.23■□□□□ 0.35
VRK3-225ENST00000601912 SLC6A14Q9UN76 642 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 KLK4Q9Y5K2 254 aa17.23■□□□□ 0.35
VRK3-225ENST00000601912 A0A1W2PP18 115 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 GNG14A0A1W2PPG7 69 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 OR2A25A4D2G3 310 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 C9JVG2 144 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 SAP18O00422 153 aaKnown RBP17.22■□□□□ 0.35
VRK3-225ENST00000601912 MRASO14807 208 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 PCDH7O60245 1069 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 PROS1P07225 676 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 ANXA4P09525 319 aaPredicted RBP17.22■□□□□ 0.35
VRK3-225ENST00000601912 IL12AP29459 219 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 TIA1P31483 386 aaKnown RBP eCLIP17.22■□□□□ 0.35
VRK3-225ENST00000601912 ASMTP46597 345 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 EPHA4P54764 986 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 COQ5Q5HYK3 327 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 COMMD6Q7Z4G1 85 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 DSELQ8IZU8 1212 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 NLGN3Q9NZ94 848 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 LRIT1Q9P2V4 623 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 POMT2Q9UKY4 750 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 MAPRE3Q9UPY8 281 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 PCDHGA4Q9Y5G9 962 aa17.22■□□□□ 0.35
VRK3-225ENST00000601912 FBP2O00757 339 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CFLARO15519 480 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 NUDT21O43809 227 aaKnown RBP17.21■□□□□ 0.35
VRK3-225ENST00000601912 PRMT3O60678 531 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 IL6P05231 212 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 ITGAXP20702 1163 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CAPN3P20807 821 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 PRPS1L1P21108 318 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 TACR1P25103 407 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 PGM1P36871 562 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CAPZBP47756 277 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 ZFP36L2P47974 494 aaKnown RBP17.21■□□□□ 0.35
VRK3-225ENST00000601912 RELAQ04206 551 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 GLIPR1L2Q4G1C9 344 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 TMEM35AQ53FP2 167 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 TRIM61Q5EBN2 209 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 PAGE2Q7Z2X7 111 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CLHC1Q8NHS4 586 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CREB3L4Q8TEY5 395 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 STARD8Q92502 1023 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 RGMAQ96B86 450 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 THAP11Q96EK4 314 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 QRFPRQ96P65 431 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 F2RL3Q96RI0 385 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CLMPQ9H6B4 373 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 GAREM1Q9H706 876 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 CAPN10Q9HC96 672 aa17.21■□□□□ 0.35
VRK3-225ENST00000601912 TMEM131Q92545 1883 aa17.21■□□□□ 0.34
VRK3-225ENST00000601912 CER1O95813 267 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SYPP08247 313 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 GLB1P16278 677 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 RAE1P78406 368 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 CYP4F3Q08477 520 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 ZCCHC8Q6NZY4 707 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 SLC23A3Q6PIS1 610 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 DEFB107AQ8IZN7 70 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 BAHD1Q8TBE0 780 aaPredicted RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 ROPN1LQ96C74 230 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SLC45A3Q96JT2 553 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 REXO4Q9GZR2 422 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 SEMA6CQ9H3T2 930 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 MCM8Q9UJA3 840 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 LEF1Q9UJU2 399 aaPredicted RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 RNF215Q9Y6U7 377 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 SNRNP200O75643 2136 aaKnown RBP17.2■□□□□ 0.34
VRK3-225ENST00000601912 CABIN1Q9Y6J0 2220 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 ARHGAP10A1A4S6 786 aa17.2■□□□□ 0.34
VRK3-225ENST00000601912 LRIT2A6NDA9 550 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms