RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PWP1Q13610 501 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 HERC3Q15034 1050 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 PCOLCEQ15113 449 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 ZXDCQ2QGD7 858 aaPredicted RBP14.95□□□□□ -0.02
VRK3-221ENST00000600284 FAAH2Q6GMR7 532 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 NIPAL1Q6NVV3 410 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 NKAPQ8N5F7 415 aaKnown RBP14.95□□□□□ -0.02
VRK3-221ENST00000600284 BBOF1Q8ND07 529 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 BRIX1Q8TDN6 353 aaKnown RBP14.95□□□□□ -0.02
VRK3-221ENST00000600284 FAR1Q8WVX9 515 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 OLFM1Q99784 485 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 TRIM51Q9BSJ1 452 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 NSMCE4AQ9NXX6 385 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 PTGFRNQ9P2B2 879 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 SLC17A6Q9P2U8 582 aa14.95□□□□□ -0.02
VRK3-221ENST00000600284 TRBC2A0A5B9 178 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 ZNF37AP17032 561 aaPredicted RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 IL1RNP18510 177 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 XCR1P46094 333 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 AGTR2P50052 363 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 SNRPNP63162 240 aaKnown RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 SKP1P63208 163 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 ARG2P78540 354 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 PDIA2Q13087 525 aaKnown RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 CSHL1Q14406 222 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 SBSNQ6UWP8 590 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 PRSS41Q7RTY9 318 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 CPEB2Q7Z5Q1 589 aaKnown RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 ZC3HC1Q86WB0 502 aaKnown RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 KCT2Q8NC54 265 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 FBXO36Q8NEA4 188 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 GRHL3Q8TE85 626 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 PYCR2Q96C36 320 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 OR4K3Q96R72 315 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 MACROD1Q9BQ69 325 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 RNF32Q9H0A6 362 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 PLEKHB1Q9UF11 243 aaPredicted RBP14.94□□□□□ -0.02
VRK3-221ENST00000600284 SLC5A6Q9Y289 635 aa14.94□□□□□ -0.02
VRK3-221ENST00000600284 CNTRLQ7Z7A1 2325 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 TRAV17A0A0B4J275 112 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 SGK494L7N484 410 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 JRKO75564 520 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 GUCA1CO95843 209 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 STATHP02808 62 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 MYBL2P10244 700 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 EDN3P14138 238 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 TNFSF10P50591 281 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 EFNA3P52797 238 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 CDKL1Q00532 357 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 INAQ16352 499 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 PPP1R3AQ16821 1122 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 MINDY4Q4G0A6 757 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 FAM180AQ6UWF9 173 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 TMEM207Q6UWW9 146 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 ANKMY2Q8IV38 441 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 AFAP1L2Q8N4X5 818 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 PLPP5Q8NEB5 264 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 CATSPER1Q8NEC5 780 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 OR1N1Q8NGS0 311 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 SLC5A11Q8WWX8 675 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 VPS39Q96JC1 886 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 OR1F2PQ96R84 312 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 TRIM31Q9BZY9 425 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 CLK4Q9HAZ1 481 aaKnown RBP14.93□□□□□ -0.02
VRK3-221ENST00000600284 TEKT2Q9UIF3 430 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 ZFP69BQ9UJL9 534 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 NAALAD2Q9Y3Q0 740 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 PSAT1Q9Y617 370 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 MAST4O15021 2626 aa14.93□□□□□ -0.02
VRK3-221ENST00000600284 FAM95CA0A1B0GW59 222 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 NDUFS4O43181 175 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 OR1F1O43749 312 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 ITGAMP11215 1152 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 AHRP35869 848 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 HNMTP50135 292 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 PGGT1BP53609 377 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 MFSD4BQ5TF39 518 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 PLAG1Q6DJT9 500 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 PDSS2Q86YH6 399 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 SIRT6Q8N6T7 355 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 BCORP1Q8N888 145 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 ZCCHC10Q8TBK6 192 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 NT5CQ8TCD5 201 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 NEIL2Q969S2 332 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 C5orf34Q96MH7 638 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 KRT12Q99456 494 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 MCMBPQ9BTE3 642 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 PELI2Q9HAT8 420 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 POPDC3Q9HBV1 291 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 HCN3Q9P1Z3 774 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 ERRFI1Q9UJM3 462 aaPredicted RBP14.92□□□□□ -0.02
VRK3-221ENST00000600284 SNX24Q9Y343 169 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 KCNE2Q9Y6J6 123 aa14.92□□□□□ -0.02
VRK3-221ENST00000600284 FAM187AA6NFU0 413 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 URADA6NGE7 173 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 EIF3HO15372 352 aaKnown RBP eCLIP14.91□□□□□ -0.02
VRK3-221ENST00000600284 GALR3O60755 368 aaPredicted RBP14.91□□□□□ -0.02
VRK3-221ENST00000600284 RDH16O75452 317 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 LDLRP01130 860 aa14.91□□□□□ -0.02
VRK3-221ENST00000600284 UQCRHP07919 91 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms