RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 IRF8Q02556 426 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 CLCQ05315 142 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 OR4N4Q8N0Y3 316 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 CCNYL1Q8N7R7 359 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 OR1L3Q8NH93 324 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 PTCD3Q96EY7 689 aaKnown RBP18.01■□□□□ 0.47
CCDC9-205ENST00000600117 SELENOSQ9BQE4 189 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 AIF1LQ9BQI0 150 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 EFCAB11Q9BUY7 163 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 NTMT1Q9BV86 223 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 MLXIPLQ9NP71 852 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 ENAMQ9NRM1 1142 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 SLC39A1Q9NY26 324 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 NOTCH2Q04721 2471 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 USP9YO00507 2555 aaPredicted RBP18■□□□□ 0.47
CCDC9-205ENST00000600117 NBPF19A0A087WUL8 3843 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 KCNE1BA0A087WTH5 132 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 TMEM150CB9EJG8 249 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 H0YGG7 62 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 BIRC5O15392 142 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 SPTBP11277 2137 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 RBMS1P29558 406 aaKnown RBP18■□□□□ 0.47
CCDC9-205ENST00000600117 SCTRP47872 440 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 MAPK10P53779 464 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 ARF3P61204 181 aaPredicted RBP18■□□□□ 0.47
CCDC9-205ENST00000600117 RPS15AP62244 130 aaKnown RBP18■□□□□ 0.47
CCDC9-205ENST00000600117 FOXM1Q08050 763 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 IL11RAQ14626 422 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 GRHL2Q6ISB3 625 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 FOXR1Q6PIV2 292 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 CCDC81Q6ZN84 652 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 FRMD7Q6ZUT3 714 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 VN1R4Q7Z5H5 301 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 L3MBTL4Q8NA19 623 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 MFSD9Q8NBP5 474 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 TRPC4APQ8TEL6 797 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 PPP4R1Q8TF05 950 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 THAP11Q96EK4 314 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 SLC46A1Q96NT5 459 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 CTRCQ99895 268 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 NT5DC2Q9H857 520 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 ZNF225Q9UK10 706 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 RARRES3Q9UL19 164 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 PCDHGA4Q9Y5G9 962 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 PCDHGA3Q9Y5H0 932 aa18■□□□□ 0.47
CCDC9-205ENST00000600117 UTP20O75691 2785 aaKnown RBP18■□□□□ 0.47
CCDC9-205ENST00000600117 POLR1CO15160 346 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 SRPX2O60687 465 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 UGDHO60701 494 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 H2AFYO75367 372 aaKnown RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 TIAF1O95411 115 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 NTRK1P04629 796 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 CXCR2P25025 360 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 HPDP32754 393 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 GRK3P35626 688 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 CCR10P46092 362 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 CCNG1P51959 295 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 NAA20P61599 178 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 NFATC3Q12968 1075 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 COLEC12Q5KU26 742 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 LIPJQ5W064 366 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 CES4AQ5XG92 561 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 BPHLQ86WA6 291 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 ANKRD53Q8N9V6 530 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 OR8K5Q8NH50 307 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 USP7Q93009 1102 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 CDK15Q96Q40 435 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 TAAR9Q96RI9 348 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 ZNF382Q96SR6 550 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 DDA1Q9BW61 102 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 TRIM4Q9C037 500 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 PITHD1Q9GZP4 211 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 SPRTNQ9H040 489 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 ACTR8Q9H981 624 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 FANCEQ9HB96 536 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 NKIRAS1Q9NYS0 192 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 ZNF490Q9ULM2 529 aaPredicted RBP17.99■□□□□ 0.47
CCDC9-205ENST00000600117 RNF11Q9Y3C5 154 aa17.99■□□□□ 0.47
CCDC9-205ENST00000600117 NBASA2RRP1 2371 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 WDR91A4D1P6 747 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 C9orf172C9J069 976 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 UBFD1O14562 309 aaKnown RBP17.98■□□□□ 0.47
CCDC9-205ENST00000600117 TERTO14746 1132 aaKnown RBP17.98■□□□□ 0.47
CCDC9-205ENST00000600117 P2RX6O15547 441 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 OR1F1O43749 312 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 TNFSF15O95150 251 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 CLDN9O95484 217 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 HNF4AP41235 474 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 GCGRP47871 477 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 ITGA1P56199 1179 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 VSX2P58304 361 aaPredicted RBP17.98■□□□□ 0.47
CCDC9-205ENST00000600117 RAB15P59190 212 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 ASPHQ12797 758 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 LCP2Q13094 533 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 LAPTM5Q13571 262 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 RBBP7Q16576 425 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCDC9-205ENST00000600117 GGTA1PQ4G0N0 100 aa17.98■□□□□ 0.47
CCDC9-205ENST00000600117 CFAP157Q5JU67 520 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms