RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 CCT6BQ92526 530 aa17.76■□□□□ 0.43
KHSRP-211ENST00000599642 N4BP2L2Q92802 583 aaPredicted RBP17.76■□□□□ 0.43
KHSRP-211ENST00000599642 SYNDIG1Q9H7V2 258 aa17.76■□□□□ 0.43
KHSRP-211ENST00000599642 DLL3Q9NYJ7 618 aa17.76■□□□□ 0.43
KHSRP-211ENST00000599642 AHSPQ9NZD4 102 aa17.76■□□□□ 0.43
KHSRP-211ENST00000599642 SERTAD3Q9UJW9 196 aa17.76■□□□□ 0.43
KHSRP-211ENST00000599642 PTPRBP23467 1997 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 A0A1B0GTL3 188 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 FITM1A5D6W6 292 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 GMNCA6NCL1 334 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 POLR3GO15318 223 aaPredicted RBP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 LCMT2O60294 686 aaKnown RBP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 TROVE2P10155 538 aaKnown RBP eCLIP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 PVRP15151 417 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 MPSTP25325 297 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 BCL6P41182 706 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 CCR10P46092 362 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 PDX1P52945 283 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 RAB15P59190 212 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 GNGT1P63211 74 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 TGM3Q08188 693 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 RSPO4Q2I0M5 234 aaPredicted RBP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 PHF19Q5T6S3 580 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 ATG14Q6ZNE5 492 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.75■□□□□ 0.438e-6■■■■■ 36.8
KHSRP-211ENST00000599642 ANKRD53Q8N9V6 530 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 HUS1BQ8NHY5 278 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 TWIST2Q8WVJ9 160 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SLC13A3Q8WWT9 602 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 PPM1MQ96MI6 270 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 ZPBPQ9BS86 351 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 TRIM55Q9BYV6 548 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SPNS1Q9H2V7 528 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 CLK4Q9HAZ1 481 aaKnown RBP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 FAM60AQ9NP50 221 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SLCO1B3Q9NPD5 702 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 DMRT3Q9NQL9 472 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 RIC8BQ9NVN3 520 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SIRT5Q9NXA8 310 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 SIDT1Q9NXL6 827 aaKnown RBP17.75■□□□□ 0.43
KHSRP-211ENST00000599642 KLHL3Q9UH77 587 aa17.75■□□□□ 0.43
KHSRP-211ENST00000599642 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 A0A0J9YVX5 310 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 FEZF1A0PJY2 475 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 RGS14O43566 566 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 RSL1D1O76021 490 aaKnown RBP17.74■□□□□ 0.43
KHSRP-211ENST00000599642 VIMP08670 466 aaKnown RBP17.74■□□□□ 0.43
KHSRP-211ENST00000599642 HBQ1P09105 142 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 ACPPP15309 386 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 ARSFP54793 590 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 FOXA1P55317 472 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 GRM7Q14831 915 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 NDUFA9Q16795 377 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 FAM214AQ32MH5 1076 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 SNAP47Q5SQN1 464 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 FAM20CQ8IXL6 584 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 GPR135Q8IZ08 494 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 CREB3L4Q8TEY5 395 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 MVB12AQ96EY5 273 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 TEFMQ96QE5 360 aaKnown RBP17.74■□□□□ 0.43
KHSRP-211ENST00000599642 MS4A8Q9BY19 250 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 SLC6A16Q9GZN6 736 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 ROGDIQ9GZN7 287 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 MEAF6Q9HAF1 191 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 ACSS2Q9NR19 701 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 MRGBPQ9NV56 204 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 SLC22A7Q9Y694 548 aa17.74■□□□□ 0.43
KHSRP-211ENST00000599642 A0A088AWK7 358 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 CCDC187A0A096LP49 1063 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 H0YGG7 62 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 PDYNP01213 254 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 PCNAP12004 261 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 FGF5P12034 268 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ZNF10P21506 573 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 GSTM5P46439 218 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 SEPHS1P49903 392 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ITGA1P56199 1179 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ARF3P61204 181 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 MC2RQ01718 297 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 MEF2AQ02078 507 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 FAM53BQ14153 422 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 DEPDC1Q5TB30 811 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 HES3Q5TGS1 186 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 CLEC6AQ6EIG7 209 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 DHRS13Q6UX07 377 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 VN1R4Q7Z5H5 301 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 TTC29Q8NA56 475 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ZNF740Q8NDX6 193 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ZNF501Q96CX3 271 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 C19orf60Q96EN9 201 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ZNF395Q9H8N7 513 aaPredicted RBP17.73■□□□□ 0.43
KHSRP-211ENST00000599642 TNFRSF12AQ9NP84 129 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 FGF21Q9NSA1 209 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 VPS29Q9UBQ0 182 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 ADAM29Q9UKF5 820 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 RARRES3Q9UL19 164 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 SRPK3Q9UPE1 567 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 TMED5Q9Y3A6 229 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 TIMM22Q9Y584 194 aa17.73■□□□□ 0.43
KHSRP-211ENST00000599642 USH1CQ9Y6N9 552 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms