RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SLCO4C1Q6ZQN7 724 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 SHISA6Q6ZSJ9 500 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 TAOK1Q7L7X3 1001 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 PPP1R32Q7Z5V6 425 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 MRGPREQ86SM8 312 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 TMPRSS11BQ86T26 416 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 TMEM102Q8N9M5 508 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-204ENST00000597724 ANKRD53Q8N9V6 530 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 KCT2Q8NC54 265 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 C9orf43Q8TAL5 461 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-204ENST00000597724 STT3BQ8TCJ2 826 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 EXT2Q93063 718 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 GPR78Q96P69 363 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 AIF1LQ9BQI0 150 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 CD244Q9BZW8 370 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 ING2Q9H160 280 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 SOX17Q9H6I2 414 aaPredicted RBP15.89■□□□□ 0.13
SSBP4-204ENST00000597724 DNAJC11Q9NVH1 559 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 NUDT4Q9NZJ9 180 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 TRPC4Q9UBN4 977 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 ZFP69BQ9UJL9 534 aa15.89■□□□□ 0.13
SSBP4-204ENST00000597724 ZNF462Q96JM2 2506 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 EXOC1LA0A1B0GW35 172 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MKRN2OSH3BPM6 223 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 UBXN8O00124 270 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 NSA2O95478 260 aaKnown RBP15.88■□□□□ 0.13
SSBP4-204ENST00000597724 S100BP04271 92 aaPredicted RBP15.88■□□□□ 0.13
SSBP4-204ENST00000597724 ZGLP1P0C6A0 271 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MTHFD2P13995 350 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MMP11P24347 488 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 VARSP26640 1264 aaKnown RBP15.88■□□□□ 0.13
SSBP4-204ENST00000597724 AVPR1BP47901 424 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 CHAF1BQ13112 559 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 PWP1Q13610 501 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 SLC29A2Q14542 456 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 VWA2Q5GFL6 755 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 ATG9BQ674R7 924 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MED25Q71SY5 747 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 PRSS41Q7RTY9 318 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 GSPT2Q8IYD1 628 aaKnown RBP15.88■□□□□ 0.13
SSBP4-204ENST00000597724 OR9A4Q8NGU2 314 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MIEF2Q96C03 454 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MOCOSQ96EN8 888 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 VPS11Q9H270 941 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 ACSS2Q9NR19 701 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 GPRC5BQ9NZH0 403 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 MAP4K5Q9Y4K4 846 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 SLC22A7Q9Y694 548 aa15.88■□□□□ 0.13
SSBP4-204ENST00000597724 SYCE1LA8MT33 242 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 SUPT3HB4E1H0 165 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 TRIM49D1C9J1S8 452 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 H0YIG0 161 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 NDUFS4O43181 175 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 H2AFYO75367 372 aaKnown RBP15.87■□□□□ 0.13
SSBP4-204ENST00000597724 SUPT3HO75486 399 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 CXCR2P25025 360 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 GCAP28676 217 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 GLRBP48167 497 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 CCL11P51671 97 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 RRADP55042 308 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 KLC1Q07866 573 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 PDK4Q16654 411 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 TCTN3Q6NUS6 607 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 LAPTM4BQ86VI4 370 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 PLD6Q8N2A8 252 aaKnown RBP15.87■□□□□ 0.13
SSBP4-204ENST00000597724 TRPV3Q8NET8 790 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 ZCCHC10Q8TBK6 192 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 NT5CQ8TCD5 201 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 YIPF2Q9BWQ6 316 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 TGIF2Q9GZN2 237 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 EPB41L4BQ9H329 900 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 EHD1Q9H4M9 534 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 MKKSQ9NPJ1 570 aaPredicted RBP15.87■□□□□ 0.13
SSBP4-204ENST00000597724 SEMA3GQ9NS98 782 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 P4HTMQ9NXG6 502 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 ASB1Q9Y576 335 aa15.87■□□□□ 0.13
SSBP4-204ENST00000597724 SCN3AQ9NY46 2000 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 B8ZZF3 427 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 AGPSO00116 658 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PEX12O00623 359 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 SOCS6O14544 535 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 MAP2K7O14733 419 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 FFAR3O14843 346 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 CLGNO14967 610 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 GPR42O15529 346 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 CCNT2O60583 730 aaKnown RBP15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PRAMEF4O60810 478 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 CEACAM4O75871 244 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 IGHEP01854 428 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 SERPIND1P05546 499 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 SNRPAP09012 282 aaKnown RBP15.86■□□□□ 0.13
SSBP4-204ENST00000597724 IL1RNP18510 177 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 EPORP19235 508 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 AGTR2P50052 363 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 NFATC3Q12968 1075 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 RBBP5Q15291 538 aaKnown RBP15.86■□□□□ 0.13
SSBP4-204ENST00000597724 SYT16Q17RD7 645 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 DCAF10Q5QP82 559 aa15.86■□□□□ 0.13
SSBP4-204ENST00000597724 PRAMEF9Q5VWM5 478 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms