RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 SPSB2Q99619 263 aa20.83■□□□□ 0.93
HOMER3-206ENST00000594439 ARHGAP9Q9BRR9 750 aa20.83■□□□□ 0.93
HOMER3-206ENST00000594439 DRC3Q9H069 523 aa20.83■□□□□ 0.93
HOMER3-206ENST00000594439 GEMIN8Q9NWZ8 242 aaKnown RBP20.83■□□□□ 0.93
HOMER3-206ENST00000594439 ATRXP46100 2492 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 SCN3AQ9NY46 2000 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 A0A0A6YYC8 382 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 VSTM2BA6NLU5 285 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 I3L1I5 382 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 TK2O00142 265 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 CCNT2O60583 730 aaKnown RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 SHBGP04278 402 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 FAM87AP0C7U9 286 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 EPORP19235 508 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 AHRP35869 848 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 DSG2Q14126 1118 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 SSPNQ14714 243 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 PDK4Q16654 411 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 AMER3Q8N944 861 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 MMABQ96EY8 250 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 CCDC77Q9BR77 488 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 PSMC3IPQ9P2W1 217 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 ZFP69BQ9UJL9 534 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 MAN2B2Q9Y2E5 1009 aa20.82■□□□□ 0.92
HOMER3-206ENST00000594439 V9GYY5 206 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-206ENST00000594439 IGLV3-12A0A075B6K2 115 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 CLGNO14967 610 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 H2AFYO75367 372 aaKnown RBP20.81■□□□□ 0.92
HOMER3-206ENST00000594439 SLC35G6P0C7Q6 338 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 POLE2P56282 527 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 PWP1Q13610 501 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 SLBPQ14493 270 aaKnown RBP eCLIP20.81■□□□□ 0.92
HOMER3-206ENST00000594439 SETDB1Q15047 1291 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 TSNAXIP1Q2TAA8 658 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 WDR93Q6P2C0 686 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 PRSS41Q7RTY9 318 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 RAB43Q86YS6 212 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 OR9A4Q8NGU2 314 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 ZCCHC10Q8TBK6 192 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 NT5CQ8TCD5 201 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 MZB1Q8WU39 189 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 WDR34Q96EX3 536 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 SEMA4CQ9C0C4 833 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 EHD1Q9H4M9 534 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 COPG2Q9UBF2 871 aa20.81■□□□□ 0.92
HOMER3-206ENST00000594439 NXT1Q9UKK6 140 aaKnown RBP20.81■□□□□ 0.92
HOMER3-206ENST00000594439 MED13Q9UHV7 2174 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 IQANK1A0A1B0GTG1 560 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 K7EPI3 171 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 PRPF4O43172 522 aaKnown RBP eCLIP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 NDUFS4O43181 175 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 NSA2O95478 260 aaKnown RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 RBP1P09455 135 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 GFAPP14136 432 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 CXCR2P25025 360 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 OTX2P32243 289 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 RBBP5Q15291 538 aaKnown RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 PFKFB4Q16877 469 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 PPP1R32Q7Z5V6 425 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 APLFQ8IW19 511 aaPredicted RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 STT3BQ8TCJ2 826 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 CREB3L4Q8TEY5 395 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 SOX17Q9H6I2 414 aaPredicted RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 NT5DC2Q9H857 520 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 CPSF2Q9P2I0 782 aaKnown RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 XPR1Q9UBH6 696 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 OPTCQ9UBM4 332 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 ZNF282Q9UDV7 671 aaPredicted RBP20.8■□□□□ 0.92
HOMER3-206ENST00000594439 SLC22A7Q9Y694 548 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 ATMQ13315 3056 aa20.8■□□□□ 0.92
HOMER3-206ENST00000594439 H0YIG0 161 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 FFAR3O14843 346 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 GPR42O15529 346 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 SERPIND1P05546 499 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 IL1RNP18510 177 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 CD22P20273 847 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 HSD17B3P37058 310 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 AVPR1BP47901 424 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 ALDH18A1P54886 795 aaKnown RBP20.79■□□□□ 0.92
HOMER3-206ENST00000594439 HYAL2Q12891 473 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 ATP1A4Q13733 1029 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 DOC2AQ14183 400 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 E2F2Q14209 437 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 NAA30Q147X3 362 aaPredicted RBP20.79■□□□□ 0.92
HOMER3-206ENST00000594439 XKR6Q5GH73 641 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 TMIGD1Q6UXZ0 262 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 SHISA6Q6ZSJ9 500 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 MRGPREQ86SM8 312 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 PDSS2Q86YH6 399 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 AFAP1L2Q8N4X5 818 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 TRPV3Q8NET8 790 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 AENQ8WTP8 325 aaKnown RBP20.79■□□□□ 0.92
HOMER3-206ENST00000594439 SCYL1Q96KG9 808 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 PITHD1Q9GZP4 211 aaPredicted RBP20.79■□□□□ 0.92
HOMER3-206ENST00000594439 ADNPQ9H2P0 1102 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 TRPC4Q9UBN4 977 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 NUP210LQ5VU65 1888 aa20.79■□□□□ 0.92
HOMER3-206ENST00000594439 PIEZO2Q9H5I5 2752 aa20.78■□□□□ 0.92
HOMER3-206ENST00000594439 LRRC14BA6NHZ5 514 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms