RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SEMA3DO95025 777 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 GIMD1P0DJR0 217 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 HOXB3P14651 431 aaPredicted RBP19.9■□□□□ 0.78
PNKP-203ENST00000593946 MAGP20916 626 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 AHRP35869 848 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 MMEL1Q495T6 779 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 COQ5Q5HYK3 327 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 DEPDC1Q5TB30 811 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 COMMD6Q7Z4G1 85 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 DSELQ8IZU8 1212 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 TBC1D19Q8N5T2 526 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 GLB1L3Q8NCI6 653 aaPredicted RBP19.9■□□□□ 0.78
PNKP-203ENST00000593946 CREB3L4Q8TEY5 395 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 RAB3IPQ96QF0 476 aaPredicted RBP19.9■□□□□ 0.78
PNKP-203ENST00000593946 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.9■□□□□ 0.78
PNKP-203ENST00000593946 ANKMY1Q9P2S6 941 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 NDUFAF1Q9Y375 327 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 PCDHGA4Q9Y5G9 962 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 PCDHGA2Q9Y5H1 932 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 A0A1W2PP18 115 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 DYTNA2CJ06 578 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 MYO1DO94832 1006 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 UBXN7O94888 489 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 TIA1P31483 386 aaKnown RBP eCLIP19.9■□□□□ 0.78
PNKP-203ENST00000593946 DUOXA1Q1HG43 343 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 KHDRBS2Q5VWX1 349 aaKnown RBP19.9■□□□□ 0.78
PNKP-203ENST00000593946 RETREG3Q86VR2 466 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 CLHC1Q8NHS4 586 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 MCUR1Q96AQ8 359 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 TMEM74Q96NL1 305 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 TSSK3Q96PN8 268 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 CLMPQ9H6B4 373 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 AP1M2Q9Y6Q5 423 aa19.9■□□□□ 0.78
PNKP-203ENST00000593946 FRYLO94915 3013 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 A0A1B0GTQ1 180 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 ASPDHA6ND91 283 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 SAP18O00422 153 aaKnown RBP19.89■□□□□ 0.77
PNKP-203ENST00000593946 MRASO14807 208 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 ANGPT2O15123 496 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 ZW10O43264 779 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 TYRP1P17643 537 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 EPHA8P29322 1005 aaPredicted RBP19.89■□□□□ 0.77
PNKP-203ENST00000593946 DPP6P42658 865 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 ART3Q13508 389 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 KLHL35Q6PF15 583 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 KANSL1Q7Z3B3 1105 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 RABEPKQ7Z6M1 372 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 RIMKLAQ8IXN7 391 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 DEFB107AQ8IZN7 70 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 KRTCAP2Q8N6L1 136 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 MFSD9Q8NBP5 474 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 VPS33AQ96AX1 596 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 EGLN2Q96KS0 407 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 ZBTB18Q99592 522 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 EVA1BQ9NVM1 165 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 NDE1Q9NXR1 346 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 POMT2Q9UKY4 750 aa19.89■□□□□ 0.77
PNKP-203ENST00000593946 A0A0J9YY10 115 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 CCDC154A6NI56 674 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PLPP1O14494 284 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PCDH7O60245 1069 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 EEDO75530 441 aaKnown RBP19.88■□□□□ 0.77
PNKP-203ENST00000593946 PGM1P36871 562 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 LSSP48449 732 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 CLNS1AP54105 237 aaKnown RBP19.88■□□□□ 0.77
PNKP-203ENST00000593946 PPP1CAP62136 330 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 RPS15AP62244 130 aaKnown RBP19.88■□□□□ 0.77
PNKP-203ENST00000593946 BIRC2Q13490 618 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ZIC1Q15915 447 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 TIGD2Q4W5G0 525 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 FCRL6Q6DN72 434 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 FIGLAQ6QHK4 219 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 C16orf89Q6UX73 402 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 HACD2Q6Y1H2 254 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ZNF438Q7Z4V0 828 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ARL10Q8N8L6 244 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 CEP76Q8TAP6 659 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 NUDT8Q8WV74 236 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ZUFSPQ96AP4 578 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 SLC38A3Q99624 504 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 MMADHCQ9H3L0 296 aaPredicted RBP19.88■□□□□ 0.77
PNKP-203ENST00000593946 SYNPO2LQ9H987 977 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 CAPN10Q9HC96 672 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ASXL3Q9C0F0 2248 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PRMT3O60678 531 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 CFIP05156 583 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ANXA4P09525 319 aaPredicted RBP19.88■□□□□ 0.77
PNKP-203ENST00000593946 CAPZBP47756 277 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 C21orf58P58505 322 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 RELAQ04206 551 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 TLR1Q15399 786 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 HLA-BQ31612 363 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 ARMC6Q6NXE6 501 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PGAM4Q8N0Y7 254 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PCYOX1LQ8NBM8 494 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 TRPV3Q8NET8 790 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 WDR48Q8TAF3 677 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 TESCQ96BS2 214 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 PPM1MQ96MI6 270 aa19.88■□□□□ 0.77
PNKP-203ENST00000593946 F2RL3Q96RI0 385 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms