RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CENPPQ6IPU0 288 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 PLXDC2Q6UX71 529 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 LINC00696Q6ZRV3 163 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 MSANTD1Q6ZTZ1 278 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 OTOAQ7RTW8 1153 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 BNIPLQ7Z465 357 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 ZNF329Q86UD4 541 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 ZFHX4Q86UP3 3567 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 PSMA8Q8TAA3 256 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 PRUNE2Q8WUY3 3088 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 SEMA4DQ92854 862 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 STAMBPL1Q96FJ0 436 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 GUCD1Q96NT3 240 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 FAM111AQ96PZ2 611 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 TRPM7Q96QT4 1865 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 GCOM2Q9BZD3 368 aaPredicted RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 RTN4RQ9BZR6 473 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 DPH5Q9H2P9 285 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 GIMAP4Q9NUV9 329 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 SLC38A7Q9NVC3 462 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 SEC63Q9UGP8 760 aaKnown RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 AMACRQ9UHK6 382 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 APPL1Q9UKG1 709 aa4.59□□□□□ -1.67
SMAD4-216ENST00000593223 DICER1Q9UPY3 1922 aaKnown RBP4.59□□□□□ -1.67
SMAD4-216ENST00000593223 BDP1A6H8Y1 2624 aa4.59□□□□□ -1.68
SMAD4-216ENST00000593223 CPSF1Q10570 1443 aaKnown RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 POLR3AO14802 1390 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 INSRP06213 1382 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 KIF16BQ96L93 1317 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 A0A087WYN8 130 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 A0A1W2PRV1 198 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 A4D1N5 150 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 GLOD5A6NK44 160 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 FAM86B1E9PN63 330 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ANGPT2O15123 496 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ENTPD3O75355 529 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 WISP2O76076 250 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 BAG4O95429 457 aaKnown RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 PLGP00747 810 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ASGR1P07306 291 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 KRT5P13647 590 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HSD17B2P37059 387 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HSD17B4P51659 736 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 SUOXP51687 545 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 GBX2P52951 348 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HAND2P61296 217 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 MBTD1Q05BQ5 628 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 CCDC173Q0VFZ6 552 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HYAL1Q12794 435 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 TRDNQ13061 729 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 PLA2G7Q13093 441 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 DMP1Q13316 513 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 MEP1BQ16820 701 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 SLC39A12Q504Y0 691 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 RAB6CQ53S08 254 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ZNF628Q5EBL2 1059 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 TEX35Q5T0J7 233 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 CCNYL2Q5T2Q4 361 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 MPP7Q5T2T1 576 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 CES4AQ5XG92 561 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ALS2CLQ60I27 953 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ETFRF1Q6IPR1 90 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ARHGAP11AQ6P4F7 1023 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 ZYG11AQ6WRX3 759 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 SPATA24Q86W54 205 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 DNAAF5Q86Y56 855 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 PTOV1Q86YD1 416 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 POC5Q8NA72 575 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 OR6J1Q8NGC5 347 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 TBC1D16Q8TBP0 767 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 SMPDL3BQ92485 455 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 SCRN2Q96FV2 425 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HES6Q96HZ4 224 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 RAB6CQ9H0N0 254 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 WNT5BQ9H1J7 359 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 EHD1Q9H4M9 534 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 TFB2MQ9H5Q4 396 aaKnown RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 GLRX2Q9NS18 164 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 MIOSQ9NXC5 875 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 PTTG2Q9NZH5 202 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 HMG20BQ9P0W2 317 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 FAM153AQ9UHL3 310 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 LEF1Q9UJU2 399 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-216ENST00000593223 CHKBQ9Y259 395 aa4.58□□□□□ -1.68
SMAD4-216ENST00000593223 MUC6Q6W4X9 2439 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 VPS8Q8N3P4 1428 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 A0A1W2PR77 199 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 A8MV72 311 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FAM72CH0Y354 149 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 H0YCG3 227 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 H0YIN7 160 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 DNM1LO00429 736 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 CETN3O15182 167 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 S100A9P06702 114 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 TPBGLP0DKB5 382 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 PRG2P13727 222 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 FDPSP14324 419 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 HMGB2P26583 209 aaKnown RBP4.57□□□□□ -1.68
SMAD4-216ENST00000593223 NRIP1P48552 1158 aa4.57□□□□□ -1.68
SMAD4-216ENST00000593223 ATXN3P54252 364 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms