RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RPS6KA2Q15349 733 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 RFTN2Q52LD8 501 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 ZFAND4Q86XD8 727 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 SFTPA2Q8IWL1 248 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 FNDC5Q8NAU1 212 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 HUS1BQ8NHY5 278 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 RP9Q8TA86 221 aaKnown RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 FLVCR1-AS1Q8TAF5 88 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 JPH3Q8WXH2 748 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 CRELD1Q96HD1 420 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 PRAP1Q96NZ9 151 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 RHBGQ9H310 441 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 MRPS30Q9NP92 439 aaKnown RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 AIG1Q9NVV5 245 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 CUEDC1Q9NWM3 386 aaPredicted RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 SNX7Q9UNH6 387 aa12.92□□□□□ -0.34
VMP1-217ENST00000593168 EIF3LQ9Y262 564 aaKnown RBP12.92□□□□□ -0.34
VMP1-217ENST00000593168 TP53BP1Q12888 1972 aaPredicted RBP12.91□□□□□ -0.34
VMP1-217ENST00000593168 IGKV1-8A0A0C4DH67 115 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 PSMD12O00232 456 aaPredicted RBP12.91□□□□□ -0.34
VMP1-217ENST00000593168 DKK1O94907 266 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 PCNAP12004 261 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 GPX3P22352 226 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 GSTM2P28161 218 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 MNAT1P51948 309 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 DIO3P55073 304 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 SHBQ15464 509 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 MAPRE2Q15555 327 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 HLA-BQ31612 363 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 C14orf28Q4W4Y0 310 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 PDCD4Q53EL6 469 aaKnown RBP12.91□□□□□ -0.34
VMP1-217ENST00000593168 IL23RQ5VWK5 629 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 ZNF425Q6IV72 752 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 MIER2Q8N344 545 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 SLC25A45Q8N413 288 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 GPR156Q8NFN8 814 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 MARK4Q96L34 752 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
VMP1-217ENST00000593168 SARGQ9BW04 601 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 SPNS1Q9H2V7 528 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 UCKL1Q9NWZ5 548 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 ACTR10Q9NZ32 417 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 TMED5Q9Y3A6 229 aa12.91□□□□□ -0.34
VMP1-217ENST00000593168 A0A1B0GTQ1 180 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 TRBC2A0A5B9 178 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 OR6C74A6NCV1 312 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 LILRA5A6NI73 299 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 MAGEB17A8MXT2 336 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 C2orf74A8MZ97 194 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 PPM1DO15297 605 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 YKT6O15498 198 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SDC3O75056 442 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SEC22BO75396 215 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 CER1O95813 267 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 COX4I1P13073 169 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 MAPK1P28482 360 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 GRK3P35626 688 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 MAZP56270 477 aaKnown RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 NCALDP61601 193 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 RPS13P62277 151 aaKnown RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 MEF2AQ02078 507 aaPredicted RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 BNIP3Q12983 259 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 DDX39BQ13838 428 aaKnown RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 RBBP5Q15291 538 aaKnown RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 DEFB133Q30KQ1 61 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 KLHL35Q6PF15 583 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 OOSP2Q86WS3 158 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 FAM9CQ8IZT9 166 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 TBC1D19Q8N5T2 526 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 ZNF740Q8NDX6 193 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 TTLQ8NG68 377 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SLC7A6OSQ96CW6 309 aaPredicted RBP12.9□□□□□ -0.34
VMP1-217ENST00000593168 FCRL1Q96LA6 429 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 OR2A14Q96R47 310 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 DPH7Q9BTV6 452 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SLC6A20Q9NP91 592 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 DMRT3Q9NQL9 472 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 HRASLS2Q9NWW9 162 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 ANKMY1Q9P2S6 941 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 BTBD3Q9Y2F9 522 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 KLK4Q9Y5K2 254 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 HEATR5BQ9P2D3 2071 aa12.9□□□□□ -0.34
VMP1-217ENST00000593168 URB1O60287 2271 aaKnown RBP12.89□□□□□ -0.35
VMP1-217ENST00000593168 LOC100653049A0A140TA62 436 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms