RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PLPP5Q8NEB5 264 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 OR4K1Q8NGD4 311 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 M1APQ8TC57 530 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 ATL1Q8WXF7 558 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 MAGEB10Q96LZ2 347 aaPredicted RBP17.82■□□□□ 0.44
CCDC43-205ENST00000592333 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 TRIM54Q9BYV2 358 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 ADAMTS6Q9UKP5 1117 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 ENTPD4Q9Y227 616 aa17.82■□□□□ 0.44
CCDC43-205ENST00000592333 PABPN1LA6NDY0 278 aaKnown RBP17.81■□□□□ 0.44
CCDC43-205ENST00000592333 DNALI1O14645 258 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-205ENST00000592333 ENO2P09104 434 aaPredicted RBP17.81■□□□□ 0.44
CCDC43-205ENST00000592333 COL8A1P27658 744 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 IL2P60568 153 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 DHX9Q08211 1270 aaKnown RBP17.81■□□□□ 0.44
CCDC43-205ENST00000592333 NAE1Q13564 534 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 MINDY4Q4G0A6 757 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 PAQR3Q6TCH7 311 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 LGI4Q8N135 537 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 MFSD9Q8NBP5 474 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 ZGRF1Q86YA3 2104 aa17.81■□□□□ 0.44
CCDC43-205ENST00000592333 HNRNPRO43390 633 aaKnown RBP17.8■□□□□ 0.44
CCDC43-205ENST00000592333 MLYCDO95822 493 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 AHSGP02765 367 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 GABRB3P28472 473 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 CCR8P51685 355 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 EFNA3P52797 238 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 MEF2AQ02078 507 aaPredicted RBP17.8■□□□□ 0.44
CCDC43-205ENST00000592333 ZNF33BQ06732 778 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 KCTD19Q17RG1 926 aaPredicted RBP17.8■□□□□ 0.44
CCDC43-205ENST00000592333 BTBD16Q32M84 506 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 ANKRD37Q7Z713 158 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 SLC26A11Q86WA9 606 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 AFAP1L2Q8N4X5 818 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 OR56A3Q8NH54 315 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 ANKRD7Q92527 254 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 LRRC39Q96DD0 335 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 PDLIM5Q96HC4 596 aaKnown RBP17.8■□□□□ 0.44
CCDC43-205ENST00000592333 ATG10Q9H0Y0 220 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 RUBCNLQ9H714 662 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 MMP25Q9NPA2 562 aa17.8■□□□□ 0.44
CCDC43-205ENST00000592333 DIDO1Q9BTC0 2240 aaKnown RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 MAGEB17A8MXT2 336 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 ZSCAN12O43309 604 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 SEC24DO94855 1032 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 TSPAN12O95859 305 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 CELA2AP08217 269 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 IL1RNP18510 177 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 RBPJQ06330 500 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 ILF2Q12905 390 aaKnown RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 ART3Q13508 389 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 FRG1Q14331 258 aaKnown RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 MEP1AQ16819 746 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 ACER2Q5QJU3 275 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 MFSD4BQ5TF39 518 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 TMEM207Q6UWW9 146 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 GFRALQ6UXV0 394 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 SYDE1Q6ZW31 735 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 GPATCH11Q8N954 259 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 KCT2Q8NC54 265 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 FBXL8Q96CD0 374 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 LINGO1Q96FE5 620 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 CERS2Q96G23 380 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 NDNQ99608 321 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 LPAR4Q99677 370 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 ARL15Q9NXU5 204 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 SUCOQ9UBS9 1254 aaKnown RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 SNX12Q9UMY4 172 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 KLF2Q9Y5W3 355 aaPredicted RBP17.79■□□□□ 0.44
CCDC43-205ENST00000592333 SVILO95425 2214 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 CREBBPQ92793 2442 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 CACNA1DQ01668 2161 aa17.79■□□□□ 0.44
CCDC43-205ENST00000592333 TRBC2A0A5B9 178 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 SGK494L7N484 410 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 LCMT2O60294 686 aaKnown RBP17.78■□□□□ 0.44
CCDC43-205ENST00000592333 ZG16O60844 167 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 F7P08709 466 aaPredicted RBP17.78■□□□□ 0.44
CCDC43-205ENST00000592333 JAK1P23458 1154 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 CDKN2DP55273 166 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 PDAP1Q13442 181 aaKnown RBP17.78■□□□□ 0.44
CCDC43-205ENST00000592333 PHKG1Q16816 387 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 C1QL3Q5VWW1 255 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 FAM45BPQ6NSW5 357 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 LANCL3Q6ZV70 420 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 PRSS41Q7RTY9 318 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 FJX1Q86VR8 437 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 PDIK1LQ8N165 341 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 HORMAD2Q8N7B1 307 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 FAM45AQ8TCE6 357 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 SNF8Q96H20 258 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 RUNDC3BQ96NL0 473 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 HCN3Q9P1Z3 774 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 COPG2Q9UBF2 871 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 SEC14L3Q9UDX4 400 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 ASIC3Q9UHC3 531 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 VWA7Q9Y334 891 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 NAALAD2Q9Y3Q0 740 aa17.78■□□□□ 0.44
CCDC43-205ENST00000592333 FEZF1A0PJY2 475 aa17.77■□□□□ 0.44
CCDC43-205ENST00000592333 URADA6NGE7 173 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms