RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 A0A0A6YYC8 382 aaPredicted RBP9.85□□□□□ -0.83
VPS4B-207ENST00000591519 EFCAB8A8MWE9 144 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 H7BY64 318 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 I3L1I5 382 aaPredicted RBP9.85□□□□□ -0.83
VPS4B-207ENST00000591519 RAD51CO43502 376 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 JRKO75564 520 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 HEXBP07686 556 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 ANXA5P08758 320 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 MAGEA3P43357 314 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 EFNA3P52797 238 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 ITGA8P53708 1063 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 THOC5Q13769 683 aaKnown RBP9.85□□□□□ -0.83
VPS4B-207ENST00000591519 PCOLCEQ15113 449 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 NDUFA9Q16795 377 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 BBS9Q3SYG4 887 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 ZNF470Q6ECI4 717 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 PCGF5Q86SE9 256 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 DENND6AQ8IWF6 608 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 ZC3H7AQ8IWR0 971 aaKnown RBP9.85□□□□□ -0.83
VPS4B-207ENST00000591519 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
VPS4B-207ENST00000591519 PPFIBP2Q8ND30 876 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 SPATA4Q8NEY3 305 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 DNAJB8Q8NHS0 232 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 CD200R1Q8TD46 325 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 NR4A3Q92570 626 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 SLCO2A1Q92959 643 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 TM4SF19Q96DZ7 209 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 SIGLEC10Q96LC7 697 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 PRAP1Q96NZ9 151 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 TAAR6Q96RI8 345 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 CYTH2Q99418 400 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 TUBB6Q9BUF5 446 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 YIPF2Q9BWQ6 316 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 PLA2G3Q9NZ20 509 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 FBXO5Q9UKT4 447 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 MKL2Q9ULH7 1088 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 MYO9AB2RTY4 2548 aa9.85□□□□□ -0.83
VPS4B-207ENST00000591519 SCN2AQ99250 2005 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 FFAR3O14843 346 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 HAT1O14929 419 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 GPR42O15529 346 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 P2RX6O15547 441 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 NSA2O95478 260 aaKnown RBP9.84□□□□□ -0.83
VPS4B-207ENST00000591519 MYBL2P10244 700 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 IMPA1P29218 277 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 RPL21P46778 160 aaKnown RBP9.84□□□□□ -0.83
VPS4B-207ENST00000591519 AVPR1BP47901 424 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 SNRPNP63162 240 aaKnown RBP9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CUL1Q13616 776 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 LONRF1Q17RB8 773 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 SYT16Q17RD7 645 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 C1QL3Q5VWW1 255 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 LRRC8EQ6NSJ5 796 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 H3F3CQ6NXT2 135 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
VPS4B-207ENST00000591519 VN1R4Q7Z5H5 301 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 SIRT6Q8N6T7 355 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CALML6Q8TD86 181 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CFAP36Q96G28 342 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 SNF8Q96H20 258 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CCDC138Q96M89 665 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 GPR21Q99679 349 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 FAM129AQ9BZQ8 928 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 PCBD2Q9H0N5 130 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CCDC68Q9H2F9 335 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 FBXO6Q9NRD1 293 aaPredicted RBP9.84□□□□□ -0.83
VPS4B-207ENST00000591519 STMN3Q9NZ72 180 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 ABI3Q9P2A4 366 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 ENTPD4Q9Y227 616 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 PCDHGB6Q9Y5F9 930 aa9.84□□□□□ -0.83
VPS4B-207ENST00000591519 CROCCQ5TZA2 2017 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 MYO7BQ6PIF6 2116 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CPAMD8Q8IZJ3 1885 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 ENO4A6NNW6 628 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 ZG16O60844 167 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 LILRA1O75019 489 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 HAUS5O94927 633 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 WDPCPO95876 746 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 SYF2O95926 243 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CELA2AP08217 269 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 C8orf89P0DMQ9 161 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 ITGAMP11215 1152 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 IVDP26440 423 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 BCL6P41182 706 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 SLC1A2P43004 574 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 RPS15AP62244 130 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CSNK1G2P78368 415 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 TIAL1Q01085 375 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CKAP4Q07065 602 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 TSTA3Q13630 321 aaPredicted RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 SP5Q6BEB4 398 aaPredicted RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 PLAG1Q6DJT9 500 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 FAAH2Q6GMR7 532 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 TMEM214Q6NUQ4 689 aaKnown RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 UGT3A1Q6NUS8 523 aa9.83□□□□□ -0.84
VPS4B-207ENST00000591519 UBE2R2Q712K3 238 aaPredicted RBP9.83□□□□□ -0.84
VPS4B-207ENST00000591519 CPEB2Q7Z5Q1 589 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms