RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CAPN13Q6MZZ7 669 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-211ENST00000590499 PRMT9Q6P2P2 845 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 OVCH1Q7RTY7 1134 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 MRGPREQ86SM8 312 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 RELL1Q8IUW5 271 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 PLD3Q8IV08 490 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CSNK1A1LQ8N752 337 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 MNS1Q8NEH6 495 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 ABHD11Q8NFV4 315 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 FBF1Q8TES7 1133 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 HIST1H2AHQ96KK5 128 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 HIST1H2AJQ99878 128 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 H2AFJQ9BTM1 129 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 FAM129AQ9BZQ8 928 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 DERL2Q9GZP9 239 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 WDR54Q9H977 334 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CAB39LQ9H9S4 337 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CTSFQ9UBX1 484 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 NDOR1Q9UHB4 597 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 GPN3Q9UHW5 284 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-211ENST00000590499 TLK1Q9UKI8 766 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 RUVBL1Q9Y265 456 aaKnown RBP10.67□□□□□ -0.7
SMAD4-211ENST00000590499 PTRH2Q9Y3E5 179 aaKnown RBP10.67□□□□□ -0.7
SMAD4-211ENST00000590499 CNTRLQ7Z7A1 2325 aa10.67□□□□□ -0.7
SMAD4-211ENST00000590499 IGLV3-12A0A075B6K2 115 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CTAGE15A4D2H0 777 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ARGFXA6NJG6 315 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 VSTM2BA6NLU5 285 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 K7EM74 188 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PHGDHO43175 533 aaKnown RBP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CEACAM4O75871 244 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 FAM155BO75949 473 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 EIF2S1P05198 315 aaKnown RBP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CTAGE8P0CG41 777 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PLA2G2AP14555 144 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 FOLR3P41439 243 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 OR1D4P47884 311 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CHAF1BQ13112 559 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 NAB1Q13506 487 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ATP1A4Q13733 1029 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 USP10Q14694 798 aaKnown RBP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 SSPNQ14714 243 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 EFTUD2Q15029 972 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 NKG7Q16617 165 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 GRTP1Q5TC63 336 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 GARNL3Q5VVW2 1013 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PPP1R32Q7Z5V6 425 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ADCK2Q7Z695 626 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ADAMTSL2Q86TH1 951 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CTAGE6Q86UF2 777 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 C17orf64Q86WR6 236 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 RAB43Q86YS6 212 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 CTAGE4Q8IX94 777 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 METTL27Q8N6F8 245 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PPM1NQ8N819 430 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 OR4K1Q8NGD4 311 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 KIF18AQ8NI77 898 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 C9orf43Q8TAL5 461 aaPredicted RBP10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ATL1Q8WXF7 558 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PTERQ96BW5 349 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 MVB12AQ96EY5 273 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 TSPAN17Q96FV3 270 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 UBXN10Q96LJ8 280 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 HAUS8Q9BT25 410 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 SARGQ9BW04 601 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 TRIM54Q9BYV2 358 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 ING2Q9H160 280 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 MLXIPLQ9NP71 852 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 TXNDC16Q9P2K2 825 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 OARD1Q9Y530 152 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 SCN3AQ9NY46 2000 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 RELNP78509 3460 aa10.66□□□□□ -0.7
SMAD4-211ENST00000590499 UBR5O95071 2799 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 MKRN2OSH3BPM6 223 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 TXNDC9O14530 226 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 FOXS1O43638 330 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 GUCA1CO95843 209 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 PDGFAP04085 211 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 PIM1P11309 404 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 CDH1P12830 882 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 CD1DP15813 335 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 STMN1P16949 149 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 OTX2P32243 289 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 BCL6P41182 706 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 SLC6A12P48065 614 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 CSRP3P50461 194 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 SLC12A2P55011 1212 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 RAB10P61026 200 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 RPS15AP62244 130 aaKnown RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 TSNQ15631 228 aaKnown RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 GLE1Q53GS7 698 aaKnown RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 LACTB2Q53H82 288 aaPredicted RBP10.65□□□□□ -0.7
SMAD4-211ENST00000590499 TCTN3Q6NUS6 607 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 C8orf86Q6ZUL3 223 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 MED25Q71SY5 747 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 CTAGE3PQ8IX95 158 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 KLHDC8AQ8IYD2 350 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 AMER3Q8N944 861 aa10.65□□□□□ -0.7
SMAD4-211ENST00000590499 TMEM102Q8N9M5 508 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms