RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TRMOQ9BU70 441 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ULBP3Q9BZM4 244 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 SEMA4BQ9NPR2 832 aaPredicted RBP18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF446Q9NWS9 450 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 ACSL6Q9UKU0 697 aa18.7■□□□□ 0.58
CIRBP-220ENST00000588917 LOC105369274A0A096LPK9 316 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 LOC102723532A0A0G2JNH3 316 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 TMEM120BA0PK00 339 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 PMS2P1A4D2B8 440 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 URADA6NGE7 173 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 H3BMH7 237 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 OR7A17O14581 309 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF749O43361 778 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 HCRTR1O43613 425 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 CPNE3O75131 537 aaKnown RBP18.69■□□□□ 0.58
CIRBP-220ENST00000588917 KLK3P07288 261 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-220ENST00000588917 CCNYL3P0C7X3 344 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ALDH3A1P30838 453 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 SERPINB5P36952 375 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 BCL6P41182 706 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 SERPINB4P48594 390 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 CDH13P55290 713 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 PKNOX1P55347 436 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 RGS1Q08116 209 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 CYP4F3Q08477 520 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 LCP2Q13094 533 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 NDUFA9Q16795 377 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 TBC1D25Q3MII6 688 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 HSP90B2PQ58FF3 399 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ASPGQ86U10 573 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 MYLK4Q86YV6 388 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-220ENST00000588917 LAS2Q8IYD9 372 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 OR4N4Q8N0Y3 316 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 TRPC4APQ8TEL6 797 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 RHBGQ9H310 441 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ZBTB26Q9HCK0 441 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 TSC22D4Q9Y3Q8 395 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 TMEM184BQ9Y519 407 aaPredicted RBP18.69■□□□□ 0.58
CIRBP-220ENST00000588917 CELSR3Q9NYQ7 3312 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 ANKRD12Q6UB98 2062 aa18.69■□□□□ 0.58
CIRBP-220ENST00000588917 HYKKA2RU49 373 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-220ENST00000588917 H0YIV9 168 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 STMND1H3BQB6 276 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 NRP2O60462 931 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 PRAMEF4O60810 478 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 STK17BO94768 372 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 KIAA0754O94854 1291 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 NEFHP12036 1026 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 PHEXP78562 749 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 MAP7Q14244 749 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 MUM1Q2TAK8 710 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 GGTA1PQ4G0N0 100 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 PRAMEF9Q5VWM5 478 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF740Q8NDX6 193 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 FGF11Q92914 225 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 CLIP3Q96DZ5 547 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 LRFN5Q96NI6 719 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 NSUN5Q96P11 429 aaKnown RBP18.68■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF382Q96SR6 550 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 DPH2Q9BQC3 489 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-220ENST00000588917 SPRY4Q9C004 299 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 EML4Q9HC35 981 aaKnown RBP18.68■□□□□ 0.58
CIRBP-220ENST00000588917 TXLNGQ9NUQ3 528 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
CIRBP-220ENST00000588917 KNTC1P50748 2209 aa18.68■□□□□ 0.58
CIRBP-220ENST00000588917 NPHS1O60500 1241 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 CLEC3AO75596 197 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 SNUPNO95149 360 aaKnown RBP18.67■□□□□ 0.58
CIRBP-220ENST00000588917 NTRK1P04629 796 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 SERPINA6P08185 405 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 DHRS4L1P0CG22 281 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 GALNT1Q10472 559 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-220ENST00000588917 MPP2Q14168 576 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PRTGQ2VWP7 1150 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 TTMPQ5BVD1 217 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 RHBDD2Q6NTF9 364 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 NIPAL1Q6NVV3 410 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 C6orf15Q6UXA7 325 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-220ENST00000588917 FRMD7Q6ZUT3 714 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 ANKRD42Q8N9B4 389 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 OR7G3Q8NG95 312 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 OR4F6Q8NGB9 312 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 OR52B6Q8NGF0 335 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PPP1R14CQ8TAE6 165 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 NT5CQ8TCD5 201 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PROKR1Q8TCW9 393 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PAIP2Q9BPZ3 127 aaKnown RBP18.67■□□□□ 0.58
CIRBP-220ENST00000588917 GATA5Q9BWX5 397 aaPredicted RBP18.67■□□□□ 0.58
CIRBP-220ENST00000588917 SPNS1Q9H2V7 528 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 GSTO2Q9H4Y5 243 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PRM3Q9NNZ6 103 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PSD3Q9NYI0 1048 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 TRPS1Q9UHF7 1281 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 PADI1Q9ULC6 663 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 CDC14AQ9UNH5 594 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 RNF11Q9Y3C5 154 aa18.67■□□□□ 0.58
CIRBP-220ENST00000588917 ADAMTS20P59510 1910 aa18.66■□□□□ 0.58
CIRBP-220ENST00000588917 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms