RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 FAM53CQ9NYF3 392 aa11□□□□□ -0.65
RFX1-204ENST00000588885 UTP6Q9NYH9 597 aaKnown RBP11□□□□□ -0.65
RFX1-204ENST00000588885 MAP10Q9P2G4 905 aa11□□□□□ -0.65
RFX1-204ENST00000588885 PCDHGA9Q9Y5G4 932 aaKnown RBP11□□□□□ -0.65
RFX1-204ENST00000588885 A0A0A6YYC8 382 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 HMGB1P1B2RPK0 211 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 I3L1I5 382 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 EIF3FO00303 357 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 P2RX6O15547 441 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 GUCA1CO95843 209 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 TSPAN12O95859 305 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ONECUT2O95948 504 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ALBP02768 609 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ALDOAP04075 364 aaKnown RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 HIST1H2AGP0C0S8 130 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 EZRP15311 586 aaKnown RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 CREB1P16220 341 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 HIST1H2ADP20671 130 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 FDXRP22570 491 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 MMP11P24347 488 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ITGA3P26006 1051 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 CNTFP26441 200 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 GMPRP36959 345 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 MAGEA12P43365 314 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 SERPINB8P50452 374 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 TBPL1P62380 186 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 SNRPNP63162 240 aaKnown RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 OCA2Q04671 838 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 KLC1Q07866 573 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ZNF460Q14592 562 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 RBBP7Q16576 425 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 SYT16Q17RD7 645 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 PRAMEF13Q5VWM6 474 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 FAAH2Q6GMR7 532 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 AGTRAPQ6RW13 159 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 KIRREL2Q6UWL6 708 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 TMEM207Q6UWW9 146 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 LAPTM4BQ86VI4 370 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 PARP9Q8IXQ6 854 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 STT3BQ8TCJ2 826 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 PYCR2Q96C36 320 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 C8orf44Q96CB5 159 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 MTBPQ96DY7 904 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 MMABQ96EY8 250 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 HIST1H2AHQ96KK5 128 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 IP6K3Q96PC2 410 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 HIST1H2AJQ99878 128 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 H2AFJQ9BTM1 129 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 CRB3Q9BUF7 120 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 STMN4Q9H169 189 aaPredicted RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 WDR54Q9H977 334 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 SNX15Q9NRS6 342 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ARL15Q9NXU5 204 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ANKMY1Q9P2S6 941 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 TRPC4Q9UBN4 977 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 IKZF3Q9UKT9 509 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 MRPS2Q9Y399 296 aaKnown RBP10.99□□□□□ -0.65
RFX1-204ENST00000588885 HS3ST3B1Q9Y662 390 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 PCSK5Q92824 1860 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 ESPL1Q14674 2120 aa10.99□□□□□ -0.65
RFX1-204ENST00000588885 NAV2Q8IVL1 2488 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 ANKRD12Q6UB98 2062 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 FEZF1A0PJY2 475 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 PABPN1LA6NDY0 278 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 VSTM2BA6NLU5 285 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 GOLGA8RI6L899 631 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 SOCS6O14544 535 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 SLC16A5O15375 505 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 PHGDHO43175 533 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 ZGLP1P0C6A0 271 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 CDH1P12830 882 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 CD97P48960 835 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 TAS2R39P59534 338 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 MAT1AQ00266 395 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 MEF2AQ02078 507 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 UBAP2LQ14157 1087 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 ZKSCAN8Q15776 578 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 ZXDCQ2QGD7 858 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 LGSNQ5TDP6 509 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 LRRC8EQ6NSJ5 796 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 FAM45BPQ6NSW5 357 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 PRMT9Q6P2P2 845 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 EXOC3L1Q86VI1 746 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 SHISA5Q8N114 240 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 RBMXL3Q8N7X1 1067 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 FAM45AQ8TCE6 357 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 UNKQ9C0B0 810 aaKnown RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 SLC26A1Q9H2B4 701 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 ZBTB20Q9HC78 741 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 TMEM184CQ9NVA4 438 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 ZNF282Q9UDV7 671 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 C3orf18Q9UK00 162 aa10.98□□□□□ -0.65
RFX1-204ENST00000588885 CORO1CQ9ULV4 474 aaPredicted RBP10.98□□□□□ -0.65
RFX1-204ENST00000588885 CDC7O00311 574 aa10.97□□□□□ -0.65
RFX1-204ENST00000588885 FOXS1O43638 330 aa10.97□□□□□ -0.65
RFX1-204ENST00000588885 LCMT2O60294 686 aaKnown RBP10.97□□□□□ -0.65
RFX1-204ENST00000588885 DPM1O60762 260 aa10.97□□□□□ -0.65
RFX1-204ENST00000588885 VPS4BO75351 444 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms