RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ACADVLP49748 655 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 MNAT1P51948 309 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 SPIN4Q56A73 249 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 PAOXQ6QHF9 649 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 CYP20A1Q6UW02 462 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 ZNF438Q7Z4V0 828 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 VN1R5Q7Z5H4 357 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 POU5F2Q8N7G0 328 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 OR4C6Q8NH72 309 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 RP9Q8TA86 221 aaKnown RBP21.32■■□□□ 1
ATG4D-209ENST00000588857 APOLD1Q96LR9 279 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 SARGQ9BW04 601 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 GTPBP2Q9BX10 602 aaKnown RBP21.32■■□□□ 1
ATG4D-209ENST00000588857 POMT2Q9UKY4 750 aa21.32■■□□□ 1
ATG4D-209ENST00000588857 RUVBL1Q9Y265 456 aaKnown RBP21.32■■□□□ 1
ATG4D-209ENST00000588857 KHNYNO15037 678 aaKnown RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 NRP2O60462 931 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 ALDH4A1P30038 563 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 AHRP35869 848 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 BCL6P41182 706 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 CYLC2Q14093 348 aaPredicted RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 HERC3Q15034 1050 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 PLA2G2CQ5R387 149 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 FIGLAQ6QHK4 219 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 SNX32Q86XE0 403 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 LIX1Q8N485 282 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 MRPL1Q9BYD6 325 aaKnown RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 OR51B5Q9H339 312 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 PADI4Q9UM07 663 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 OR2A25A4D2G3 310 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 CLEC3AO75596 197 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 SLC22A3O75751 556 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 SERPIND1P05546 499 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 ZNF806P0C7X5 589 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 PRPS2P11908 318 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 BCKDHAP12694 445 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 ACPPP15309 386 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 PCSK2P16519 638 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 PPP1CAP62136 330 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 RPS15AP62244 130 aaKnown RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 CUL3Q13618 768 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 CCDC6Q16204 474 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 NOXRED1Q6NXP6 359 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 IRGCQ6NXR0 463 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 FAM9CQ8IZT9 166 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 C1orf52Q8N6N3 182 aaKnown RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 MFSD9Q8NBP5 474 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 OR9I1Q8NGQ6 314 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 OR2I1PQ8NGU4 316 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 AHCYL2Q96HN2 611 aaKnown RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 ACTR5Q9H9F9 607 aaPredicted RBP21.31■■□□□ 1
ATG4D-209ENST00000588857 AHSPQ9NZD4 102 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 ZIM2Q9NZV7 527 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 KLK4Q9Y5K2 254 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 AP1M2Q9Y6Q5 423 aa21.31■■□□□ 1
ATG4D-209ENST00000588857 TRIM38O00635 465 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 FOXD2O60548 495 aaPredicted RBP21.3■■□□□ 1
ATG4D-209ENST00000588857 GPR3P46089 330 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 CPA2P48052 419 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 CYP4F3Q08477 520 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 TBL3Q12788 808 aaKnown RBP21.3■■□□□ 1
ATG4D-209ENST00000588857 KHDRBS2Q5VWX1 349 aaKnown RBP21.3■■□□□ 1
ATG4D-209ENST00000588857 PRR23CQ6ZRP0 262 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 TRPV3Q8NET8 790 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 BAHD1Q8TBE0 780 aaPredicted RBP21.3■■□□□ 1
ATG4D-209ENST00000588857 CHTF18Q8WVB6 975 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 CENPKQ9BS16 269 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 MS4A8Q9BY19 250 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 KLHL25Q9H0H3 589 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 ABCG4Q9H172 646 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 SEMA6CQ9H3T2 930 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 EPB41L1Q9H4G0 881 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.3■■□□□ 1
ATG4D-209ENST00000588857 TMEM45AQ9NWC5 275 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 PCDHGA4Q9Y5G9 962 aa21.3■■□□□ 1
ATG4D-209ENST00000588857 SAP18O00422 153 aaKnown RBP21.29■■□□□ 1
ATG4D-209ENST00000588857 SNRPB2P08579 225 aaKnown RBP21.29■■□□□ 1
ATG4D-209ENST00000588857 ENGP17813 658 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 CDH3P22223 829 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 LSSP48449 732 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 ATXN3P54252 364 aaPredicted RBP21.29■■□□□ 1
ATG4D-209ENST00000588857 NCALDP61601 193 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 UFM1P61960 85 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 DMTNQ08495 405 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 NR0B2Q15466 257 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 DEPDC1Q5TB30 811 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 FCRL6Q6DN72 434 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 GK5Q6ZS86 529 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 OR6C4Q8NGE1 309 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 PPM1MQ96MI6 270 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 SMOC1Q9H4F8 434 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 EVA1BQ9NVM1 165 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 DLGAP4Q9Y2H0 992 aa21.29■■□□□ 1
ATG4D-209ENST00000588857 B2RBV5 119 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 SIGLEC6O43699 453 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 PCDHGA12O60330 932 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 MYF5P13349 255 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 HOXB3P14651 431 aaPredicted RBP21.28■■□□□ 1
ATG4D-209ENST00000588857 PVRP15151 417 aa21.28■■□□□ 1
ATG4D-209ENST00000588857 RAP1GDS1P52306 607 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms