RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 A8MVJ9 347 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 H3BQV1 296 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CCP110O43303 1012 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CTSVO60911 334 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 RCBTB2O95199 551 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 PEX11BO96011 259 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 THBDP07204 575 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 FESP07332 822 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 ERVK-10P10266 1014 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 PEBP1P30086 187 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 SDC4P31431 198 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CD151P48509 253 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 TPI1P60174 286 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 KCNJ2P63252 427 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 IRX1P78414 480 aaPredicted RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 MAT1AQ00266 395 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 ITKQ08881 620 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 KIF5AQ12840 1032 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 GAB1Q13480 694 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CUL4BQ13620 913 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 PTK6Q13882 451 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 RAB35Q15286 201 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 NFKBIBQ15653 356 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 QPCTQ16769 361 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 LONRF2Q1L5Z9 754 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 PGGHGQ32M88 737 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 KLHL22Q53GT1 634 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 RNF187Q5TA31 235 aaPredicted RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 FRMPD2BQ6IN97 320 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 NXPE4Q6UWF7 544 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 GPALPP1Q8IXQ4 340 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 LILRA3Q8N6C8 439 aaPredicted RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 EMC1Q8N766 993 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 IQUBQ8NA54 791 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 NSMCE1Q8WV22 266 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 INTS12Q96CB8 462 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 RBM4BQ9BQ04 359 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 NTMT1Q9BV86 223 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 TDRD1Q9BXT4 1180 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 ACBD3Q9H3P7 528 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CDC42EP4Q9H3Q1 356 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 UGT1A7Q9HAW7 530 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 PCDH9Q9HC56 1237 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 ACKR4Q9NPB9 350 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
TPM4-210ENST00000588507 ESM1Q9NQ30 184 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 HPF1Q9NWY4 346 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 RNF112Q9ULX5 631 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 USP22Q9UPT9 525 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CAMK2AQ9UQM7 478 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 CLIC4Q9Y696 253 aa6.3□□□□□ -1.4
TPM4-210ENST00000588507 LOC105369274A0A096LPK9 316 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 LOC102723532A0A0G2JNH3 316 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 OR2W5A6NFC9 320 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 VWC2LB2RUY7 222 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 ANKRD66B4E2M5 251 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 FRS3O43559 492 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SMNDC1O75940 238 aaKnown RBP eCLIP6.29□□□□□ -1.4
TPM4-210ENST00000588507 PDE5AO76074 875 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 EPHA1P21709 976 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 NR4A2P43354 598 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 MMP13P45452 471 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TRPC1P48995 793 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SSR4P51571 173 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 NEK4P51957 841 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 OR4D2P58180 307 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 KRT85P78386 507 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 CRYZQ08257 329 aaKnown RBP6.29□□□□□ -1.4
TPM4-210ENST00000588507 KLF1Q13351 362 aaPredicted RBP6.29□□□□□ -1.4
TPM4-210ENST00000588507 RCAN2Q14206 197 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 NSDHLQ15738 373 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SLC14A2Q15849 920 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TYSND1Q2T9J0 566 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 MARC1Q5VT66 337 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SUSD1Q6UWL2 747 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 FAM47EQ6ZV65 393 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 DET1Q7L5Y6 550 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 NOP9Q86U38 636 aaKnown RBP6.29□□□□□ -1.4
TPM4-210ENST00000588507 DTX2Q86UW9 622 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 CILP2Q8IUL8 1156 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 GALNT12Q8IXK2 581 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 OR4N4Q8N0Y3 316 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 EHBP1Q8NDI1 1231 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 RAB3IL1Q8TBN0 382 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SLC44A1Q8WWI5 657 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TFGQ92734 400 aaPredicted RBP6.29□□□□□ -1.4
TPM4-210ENST00000588507 ZUFSPQ96AP4 578 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 SOX7Q9BT81 388 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 NT5MQ9NPB1 228 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 TUBA8Q9NY65 449 aaPredicted RBP6.29□□□□□ -1.4
TPM4-210ENST00000588507 RNF115Q9Y4L5 304 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
TPM4-210ENST00000588507 A0A0A6YYC8 382 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms