RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 ZNF358Q9NW07 568 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 CPSF2Q9P2I0 782 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 TRPC4Q9UBN4 977 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 TBK1Q9UHD2 729 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 TMCO1Q9UM00 188 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 TNPO3Q9Y5L0 923 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 KCNMB2Q9Y691 235 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 USP24Q9UPU5 2620 aa13.8□□□□□ -0.2
SMARCA4-212ENST00000586985 CACNA1BQ00975 2339 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 URADA6NGE7 173 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ANKDD1BA6NHY2 528 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 H0YIG0 161 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 K7EPI3 171 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 CNOT3O75175 753 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 SMIM24O75264 130 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 RFPL1O75677 317 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 IGHEP01854 428 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 FAM87AP0C7U9 286 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 MTHFD2P13995 350 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 EPB42P16452 691 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 AGTR2P50052 363 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ALDH18A1P54886 795 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 POLE2P56282 527 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 DOC2AQ14183 400 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 SLBPQ14493 270 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ERCC6LQ2NKX8 1250 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 PAGE2BQ5JRK9 111 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 PCSK4Q6UW60 755 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 COX15Q7KZN9 410 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 TTLQ8NG68 377 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 OR9A4Q8NGU2 314 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ZCCHC10Q8TBK6 192 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 STT3BQ8TCJ2 826 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ADAMTS17Q8TE56 1095 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 PTCD3Q96EY7 689 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 BBC3Q96PG8 261 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 EFCAB11Q9BUY7 163 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ADNPQ9H2P0 1102 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 EHD1Q9H4M9 534 aa13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 SOX17Q9H6I2 414 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 MKKSQ9NPJ1 570 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 GEMIN8Q9NWZ8 242 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 MRPS2Q9Y399 296 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 V9GYY5 206 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-212ENST00000586985 ARGFXA6NJG6 315 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 VSTM2BA6NLU5 285 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 KLK8O60259 260 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ZGLP1P0C6A0 271 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 GSTM2P28161 218 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 RRADP55042 308 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 SKP1P63208 163 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 CHIT1Q13231 466 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 HERC3Q15034 1050 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 SETDB1Q15047 1291 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 VWA2Q5GFL6 755 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 TECRLQ5HYJ1 363 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 NIPAL1Q6NVV3 410 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 SHISA6Q6ZSJ9 500 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ABHD13Q7L211 337 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ARHGEF39Q8N4T4 335 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 TEX9Q8N6V9 391 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 EXD3Q8N9H8 876 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ANKRD53Q8N9V6 530 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 NT5CQ8TCD5 201 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ACMSDQ8TDX5 336 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 UBTD2Q8WUN7 234 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 CCT6BQ92526 530 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 NACC2Q96BF6 587 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 MOCOSQ96EN8 888 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 FER1L6-AS2Q96M78 137 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 MRPL57Q9BQC6 102 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 ACSS2Q9NR19 701 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 XPR1Q9UBH6 696 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 CTSFQ9UBX1 484 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 MAP4K5Q9Y4K4 846 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
SMARCA4-212ENST00000586985 SGK494L7N484 410 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 SHBGP04278 402 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 UMODP07911 640 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 SERPINA6P08185 405 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 ALOX12P18054 663 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 IL1RNP18510 177 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 KRT15P19012 456 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 MMP11P24347 488 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 HSD17B3P37058 310 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 HNF4AP41235 474 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 SLCO1A2P46721 670 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 PIK3CGP48736 1102 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 CCL11P51671 97 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 EMP2P54851 167 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 FOXL2P58012 376 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 MAT1AQ00266 395 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 KCNAB2Q13303 367 aa13.77□□□□□ -0.21
SMARCA4-212ENST00000586985 PCBP2Q15366 365 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms