RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 LAS2Q8IYD9 372 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 KRT78Q8N1N4 520 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 KRTCAP2Q8N6L1 136 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 C1orf52Q8N6N3 182 aaKnown RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 GPR156Q8NFN8 814 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 CADM4Q8NFZ8 388 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 CDC26Q8NHZ8 85 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 PROKR1Q8TCW9 393 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 SLC37A2Q8TED4 501 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 WDR60Q8WVS4 1066 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 CCDC124Q96CT7 223 aaKnown RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 REPS1Q96D71 796 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 TSSK3Q96PN8 268 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 SLC39A3Q9BRY0 314 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 LRRC61Q9BV99 259 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 PCBD2Q9H0N5 130 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 MMADHCQ9H3L0 296 aaPredicted RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 EHD1Q9H4M9 534 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 DENND2DQ9H6A0 471 aaPredicted RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 EFCAB1Q9HAE3 211 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 BRF2Q9HAW0 419 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 IL1RL2Q9HB29 575 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 TM9SF3Q9HD45 589 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 SLC52A3Q9NQ40 469 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 FSCN3Q9NQT6 498 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 SPHK1Q9NYA1 384 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 SLC7A8Q9UHI5 535 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 BAIAP2L1Q9UHR4 511 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 PCOLCE2Q9UKZ9 415 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 NDUFAF1Q9Y375 327 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 PCDHGA7Q9Y5G6 932 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 MDC1Q14676 2089 aaKnown RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.85
APOC1-201ENST00000586638 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
APOC1-201ENST00000586638 IGKV1-8A0A0C4DH67 115 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 FEZF1A0PJY2 475 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 CCDC154A6NI56 674 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 B4DGG1 531 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 H7BY64 318 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 FXYD1O00168 92 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 TAF4O00268 1085 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 SAP18O00422 153 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 MGRN1O60291 552 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 KDM1AO60341 852 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 EEDO75530 441 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 LRATO95237 230 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 CHRM5P08912 532 aaPredicted RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 PRPS2P11908 318 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 JAK1P23458 1154 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 NDUFS1P28331 727 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 SHMT2P34897 504 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 ERFP50548 548 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 CCR8P51685 355 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 DGKQP52824 942 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 UBE2IP63279 158 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 PHEXP78562 749 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 ZNF33BQ06732 778 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 GRIK2Q13002 908 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 NFYCQ13952 458 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 CAPRIN1Q14444 709 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 ZNF423Q2M1K9 1284 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PAGE3Q5JUK9 113 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PEAR1Q5VY43 1037 aaPredicted RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 SLC2A7Q6PXP3 512 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 HACD2Q6Y1H2 254 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 RABEPKQ7Z6M1 372 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 TRIM73Q86UV7 250 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PLD3Q8IV08 490 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 OR4E2Q8NGC2 313 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 FAM174AQ8TBP5 190 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 LCN9Q8WX39 176 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PRAP1Q96NZ9 151 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 ZBTB18Q99592 522 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 AIF1LQ9BQI0 150 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 DPY30Q9C005 99 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 OR51B5Q9H339 312 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 MRPS30Q9NP92 439 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 NDE1Q9NXR1 346 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 VPS29Q9UBQ0 182 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 LEF1Q9UJU2 399 aaPredicted RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 CROTQ9UKG9 612 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PPT2Q9UMR5 302 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 PRPF19Q9UMS4 504 aaKnown RBP9.76□□□□□ -0.85
APOC1-201ENST00000586638 PCDHB11Q9Y5F2 797 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 COLEC10Q9Y6Z7 277 aa9.76□□□□□ -0.85
APOC1-201ENST00000586638 A0A1W2PP18 115 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 ISM1B1AKI9 464 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 BTN3A3O00478 584 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 HAT1O14929 419 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 AKAP10O43572 662 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 PRICKLE3O43900 615 aaPredicted RBP9.75□□□□□ -0.85
APOC1-201ENST00000586638 TGFB1P01137 390 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 VIPP01282 170 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 STATHP02808 62 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 SYPP08247 313 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 CD59P13987 128 aa9.75□□□□□ -0.85
APOC1-201ENST00000586638 NME1P15531 152 aaKnown RBP9.75□□□□□ -0.85
APOC1-201ENST00000586638 TIA1P31483 386 aaKnown RBP eCLIP9.75□□□□□ -0.85
APOC1-201ENST00000586638 SLC7A2P52569 658 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms