RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PPT2Q9UMR5 302 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 PCDHA9Q9Y5H5 950 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 RALGAPA1Q6GYQ0 2036 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 PCDH15Q96QU1 1955 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 PRICKLE3O43900 615 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 SH3BGRLO75368 114 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 IL6P05231 212 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 PGRP06401 933 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 CTSEP14091 401 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 TCN1P20061 433 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 MPLP40238 635 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 BLKP51451 505 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 CLNS1AP54105 237 aaKnown RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 ICE2Q659A1 982 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 DHDDSQ86SQ9 333 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 KRT78Q8N1N4 520 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 C1orf52Q8N6N3 182 aaKnown RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 OR4K1Q8NGD4 311 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 OR2A1Q8NGT9 310 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 TMEM125Q96AQ2 219 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 ASB9Q96DX5 294 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 FAM86C1Q9NVL1 165 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 ZNF624Q9P2J8 865 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 GMPR2Q9P2T1 348 aaKnown RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 STX18Q9P2W9 335 aaKnown RBP19.61■□□□□ 0.73
ATG4D-204ENST00000586417 RAB23Q9ULC3 237 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 NEUROG3Q9Y4Z2 214 aa19.61■□□□□ 0.73
ATG4D-204ENST00000586417 FKBP6O75344 327 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 BCAS2O75934 225 aaPredicted RBP19.6■□□□□ 0.73
ATG4D-204ENST00000586417 REEP5Q00765 189 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 ILF3Q12906 894 aaKnown RBP eCLIP19.6■□□□□ 0.73
ATG4D-204ENST00000586417 FLOT2Q14254 428 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 TRIM25Q14258 630 aaKnown RBP19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SHBQ15464 509 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SF1Q15637 639 aaKnown RBP19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SPIN4Q56A73 249 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 TCEAL6Q6IPX3 200 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 AAGABQ6PD74 315 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SFTPA2Q8IWL1 248 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SUMF1Q8NBK3 374 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 GTF2H4Q92759 462 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 TCEAL3Q969E4 200 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 TESCQ96BS2 214 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 LOXL4Q96JB6 756 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 ERVMER34-1Q9H9K5 563 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 UCKL1Q9NWZ5 548 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SIRT5Q9NXA8 310 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 COLEC10Q9Y6Z7 277 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 IGKV1-8A0A0C4DH67 115 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 CCR8P51685 355 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 PHC1P78364 1004 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 PRDX1Q06830 199 aaKnown RBP19.6■□□□□ 0.73
ATG4D-204ENST00000586417 BNIP3Q12983 259 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 C6orf10Q5SRN2 563 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 SLC23A3Q6PIS1 610 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 HIPK4Q8NE63 616 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 OR2I1PQ8NGU4 316 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 CEP76Q8TAP6 659 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 LMX1AQ8TE12 382 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 PRRX2Q99811 253 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 TRIM8Q9BZR9 551 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 RHBGQ9H310 441 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 IL21RQ9HBE5 538 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 S100A14Q9HCY8 104 aa19.6■□□□□ 0.73
ATG4D-204ENST00000586417 H7BY64 318 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 TBX6O95947 436 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 TGFB1P01137 390 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 F3P13726 295 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 NDUFS1P28331 727 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PEBP1P30086 187 aaKnown RBP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 C21orf58P58505 322 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 HNRNPKP61978 463 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PWP1Q13610 501 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 HLA-BQ31612 363 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 RABL3Q5HYI8 236 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 GALNT18Q6P9A2 607 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 TAF8Q7Z7C8 310 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 ANKRD53Q8N9V6 530 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 ZNF548Q8NEK5 533 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 GPR156Q8NFN8 814 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 DNAJB14Q8TBM8 379 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 SLC26A7Q8TE54 656 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PYDC1Q8WXC3 89 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PRAP1Q96NZ9 151 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 ELF4Q99607 663 aaPredicted RBP19.59■□□□□ 0.73
ATG4D-204ENST00000586417 AIF1LQ9BQI0 150 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PCDHAC1Q9H158 963 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 OR51B5Q9H339 312 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 NT5DC2Q9H857 520 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 TAAR2Q9P1P5 351 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 SLC6A14Q9UN76 642 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PCDHB11Q9Y5F2 797 aa19.59■□□□□ 0.73
ATG4D-204ENST00000586417 PRMT3O60678 531 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 PIAS2O75928 621 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 LRATO95237 230 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 HSD17B1P14061 328 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 PRPS1L1P21108 318 aa19.58■□□□□ 0.73
ATG4D-204ENST00000586417 TIA1P31483 386 aaKnown RBP eCLIP19.58■□□□□ 0.73
ATG4D-204ENST00000586417 SLC19A1P41440 591 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms