RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 RASGRP1O95267 797 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 IGHV4-34P06331 123 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 MTHFD1P11586 935 aaKnown RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 PCNAP12004 261 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 PKLRP30613 574 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 S100A3P33764 101 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 RPL3P39023 403 aaKnown RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 BLKP51451 505 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 SLC34A1Q06495 639 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 LRRC74AQ0VAA2 488 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 PWP1Q13610 501 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 TSTA3Q13630 321 aaPredicted RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 MAP7Q14244 749 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 FLOT2Q14254 428 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 SLBPQ14493 270 aaKnown RBP eCLIP9.99□□□□□ -0.81
LIG3-203ENST00000585370 NUMA1Q14980 2115 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 MAPKAPK3Q16644 382 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 GALNT18Q6P9A2 607 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 SUSD1Q6UWL2 747 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 TMIGD1Q6UXZ0 262 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 GCNT7Q6ZNI0 430 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 Q6ZSR6 202 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 FAM129CQ86XR2 697 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 GOLM1Q8NBJ4 401 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 CADM4Q8NFZ8 388 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 OR4K1Q8NGD4 311 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 OR2I1PQ8NGU4 316 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 HUS1BQ8NHY5 278 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 OR1E3Q8WZA6 343 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 GATA6Q92908 595 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 POP5Q969H6 163 aaKnown RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 ZUFSPQ96AP4 578 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 SLC22A18Q96BI1 424 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 CXorf40BQ96DE9 158 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 TEX37Q96LM6 180 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 APOLD1Q96LR9 279 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 MENTQ9BUN1 341 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 GTPBP2Q9BX10 602 aaKnown RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 TRIM15Q9C019 465 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 RHBGQ9H310 441 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 ACTL8Q9H568 366 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 S100A14Q9HCY8 104 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 OR6C2Q9NZP2 312 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 ZMIZ1Q9ULJ6 1067 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 WDR37Q9Y2I8 494 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 SMG1Q96Q15 3661 aaKnown RBP9.99□□□□□ -0.81
LIG3-203ENST00000585370 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
LIG3-203ENST00000585370 ATRXP46100 2492 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 LOC400499M0QZD8 3231 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 PIPSLA2A3N6 862 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 KRT87PA6NCN2 255 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 ANKDD1BA6NHY2 528 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 MAGEB17A8MXT2 336 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 HYAL3O43820 417 aaPredicted RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 NDUFS2O75306 463 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 ERN1O75460 977 aaKnown RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 SEMA3DO95025 777 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 FKBP9O95302 570 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 PGRP06401 933 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 CD59P13987 128 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 DDX5P17844 614 aaKnown RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 SLC6A2P23975 617 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 MAOBP27338 520 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 SHMT2P34897 504 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 GSTM5P46439 218 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 ATXN3P54252 364 aaPredicted RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 PRDX1Q06830 199 aaKnown RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 ILF3Q12906 894 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIG3-203ENST00000585370 CLCA4Q14CN2 919 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 RCN1Q15293 331 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 CATSPEREQ5SY80 951 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 IRAK1BP1Q5VVH5 260 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 FAM219BQ5XKK7 198 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 LAYNQ6UX15 382 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 RIMKLAQ8IXN7 391 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 SLC15A3Q8IY34 581 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIG3-203ENST00000585370 VPS37AQ8NEZ2 397 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 TNIP2Q8NFZ5 429 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 OR8J3Q8NGG0 315 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 SLC26A7Q8TE54 656 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 SLC13A3Q8WWT9 602 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 VPS33AQ96AX1 596 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 CCDC124Q96CT7 223 aaKnown RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 C11orf24Q96F05 449 aaPredicted RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 APIPQ96GX9 242 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 ITCHQ96J02 903 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 HSPA12BQ96MM6 686 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 QRFPRQ96P65 431 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 OR52E6Q96RD3 313 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 MTERF1Q99551 399 aaKnown RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 MYOCQ99972 504 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 GPR174Q9BXC1 333 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 GSDMCQ9BYG8 508 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 C6orf106Q9H6K1 298 aaPredicted RBP9.98□□□□□ -0.81
LIG3-203ENST00000585370 PRM3Q9NNZ6 103 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 DMRT3Q9NQL9 472 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 PRDM8Q9NQV8 689 aa9.98□□□□□ -0.81
LIG3-203ENST00000585370 IMP3Q9NV31 184 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms