RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CLIP3Q96DZ5 547 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 GATA5Q9BWX5 397 aaPredicted RBP13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 GSTO2Q9H4Y5 243 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 ZBTB26Q9HCK0 441 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 ASCL3Q9NQ33 180 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 ENAMQ9NRM1 1142 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 TRPS1Q9UHF7 1281 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 SNX6Q9UNH7 406 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
SCAMP4-209ENST00000585335 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 HYKKA2RU49 373 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 FITM1A5D6W6 292 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 H0YIV9 168 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 HCRTR1O43613 425 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 LCMT2O60294 686 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CLEC3AO75596 197 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 STK17BO94768 372 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 SNUPNO95149 360 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 ESRRBO95718 433 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 TSPAN8P19075 237 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CD22P20273 847 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 GRK2P25098 689 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 HMOX2P30519 316 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 STXBP1P61764 594 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 PPP2R2AP63151 447 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CYP4F2P78329 520 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 FOXK2Q01167 660 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 IFT88Q13099 833 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 MPP2Q14168 576 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 RCN2Q14257 317 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CPSF6Q16630 551 aaKnown RBP eCLIP13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 PRTGQ2VWP7 1150 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 TBC1D25Q3MII6 688 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 LAS2Q8IYD9 372 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 PROKR1Q8TCW9 393 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CDK15Q96Q40 435 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CENPKQ9BS16 269 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 SLC29A3Q9BZD2 475 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 SPNS1Q9H2V7 528 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 RHBGQ9H310 441 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 ELOVL6Q9H5J4 265 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 MLXIPLQ9NP71 852 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 MID1IP1Q9NPA3 183 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 STARD5Q9NSY2 213 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 CUTCQ9NTM9 273 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 FOXJ2Q9P0K8 574 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 RNF11Q9Y3C5 154 aa13.92□□□□□ -0.18
SCAMP4-209ENST00000585335 SPTBN2O15020 2390 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 TMEM114B3SHH9 223 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 PRAMEF4O60810 478 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 KRT6AP02538 564 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 KRT6BP04259 564 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 SERPINE1P05121 402 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 KLK3P07288 261 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 SERPINA6P08185 405 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 NR1D1P20393 614 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 AGXTP21549 392 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 PIK3CBP42338 1070 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 KRT6CP48668 564 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 PCBP4P57723 403 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 TGM3Q08188 693 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 DDX39BQ13838 428 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 MAP7Q14244 749 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 HKDC1Q2TB90 917 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 PRAMEF9Q5VWM5 478 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 RHBDD2Q6NTF9 364 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 NIPAL1Q6NVV3 410 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 C6orf15Q6UXA7 325 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ABHD13Q7L211 337 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 VN1R4Q7Z5H5 301 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 KIRREL3Q8IZU9 778 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ESX1Q8N693 406 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ANKRD53Q8N9V6 530 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 OR7G3Q8NG95 312 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 RAB3IL1Q8TBN0 382 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 NT5CQ8TCD5 201 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 AGAP11Q8TF27 550 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 DYDC1Q8WWB3 177 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 PMEPA1Q969W9 287 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 TM4SF19Q96DZ7 209 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 C17orf62Q9BQA9 187 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 DPH2Q9BQC3 489 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ACSS2Q9NR19 701 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 NDOR1Q9UHB4 597 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 ACSL6Q9UKU0 697 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 CDC14AQ9UNH5 594 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 RUVBL1Q9Y265 456 aaKnown RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 TSC22D4Q9Y3Q8 395 aa13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 TMEM184BQ9Y519 407 aaPredicted RBP13.91□□□□□ -0.18
SCAMP4-209ENST00000585335 A0A088AWK7 358 aa13.9□□□□□ -0.18
SCAMP4-209ENST00000585335 A0A1B0GX78 115 aa13.9□□□□□ -0.18
SCAMP4-209ENST00000585335 H3BMH7 237 aa13.9□□□□□ -0.18
SCAMP4-209ENST00000585335 FFAR3O14843 346 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms