RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 SNRPB2P08579 225 aaKnown RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 FAM87AP0C7U9 286 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 MTHFD1P11586 935 aaKnown RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 EZRP15311 586 aaKnown RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 CD22P20273 847 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 HALP42357 657 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 RAB28P51157 221 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 RAP1GDS1P52306 607 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 TBPL1P62380 186 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 KCNJ2P63252 427 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 FOXK1P85037 733 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 E2F1Q01094 437 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 RIPK1Q13546 671 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 FASTKQ14296 549 aaKnown RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 CLCA4Q14CN2 919 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 RPE65Q16518 533 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 AP5B1Q2VPB7 878 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 XKR6Q5GH73 641 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 PAGE2BQ5JRK9 111 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 TCHHL1Q5QJ38 904 aaPredicted RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 HACD2Q6Y1H2 254 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ZFAND4Q86XD8 727 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 FUNDC1Q8IVP5 155 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ARHGAP24Q8N264 748 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ABHD11Q8NFV4 315 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 OR13H1Q8NG92 308 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 OR4K1Q8NGD4 311 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 EXTL1Q92935 676 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 UBE2E3Q969T4 207 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 UTP4Q969X6 686 aaKnown RBP11.48□□□□□ -0.57
GGA3-217ENST00000583667 REPS1Q96D71 796 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 CMTM7Q96FZ5 175 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 C12orf66Q96MD2 445 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ARHGAP9Q9BRR9 750 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 SLC25A23Q9BV35 468 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 SLC52A3Q9NQ40 469 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 ADGRE2Q9UHX3 823 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 PSMD13Q9UNM6 376 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 TMED5Q9Y3A6 229 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 PLEKHM1Q9Y4G2 1056 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 PTGDR2Q9Y5Y4 395 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 NUMA1Q14980 2115 aa11.48□□□□□ -0.57
GGA3-217ENST00000583667 LOC100653049A0A140TA62 436 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 A0A1W2PR77 199 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 OR5K4A6NMS3 321 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 BBIP1A8MTZ0 92 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 ANKRD28O15084 1053 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 PRICKLE3O43900 615 aaPredicted RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 KRT34O76011 436 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 PDYNP01213 254 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 KRT16P08779 473 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 SFTPCP11686 197 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 ACP1P24666 158 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 ARL1P40616 181 aaPredicted RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 BLKP51451 505 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 C21orf59P57076 290 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 BNIP3Q12983 259 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 CPSF6Q16630 551 aaKnown RBP eCLIP11.47□□□□□ -0.57
GGA3-217ENST00000583667 CDCP2Q5VXM1 449 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 PGM2L1Q6PCE3 622 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 BLOC1S3Q6QNY0 202 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 NXPE4Q6UWF7 544 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 SNX32Q86XE0 403 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 NRROSQ86YC3 692 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 KYQ8NBH2 561 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 OR2L8Q8NGY9 312 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 SLC5A11Q8WWX8 675 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 SELENOMQ8WWX9 145 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 C11orf24Q96F05 449 aaPredicted RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 KLHDC7BQ96G42 594 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 PDXPQ96GD0 296 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 FERD3LQ96RJ6 166 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 MYOCQ99972 504 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 PELI2Q9HAT8 420 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 LRTM1Q9HBL6 345 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 C1orf109Q9NX04 203 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 NOP53Q9NZM5 478 aaKnown RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 PLEKHB1Q9UF11 243 aaPredicted RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 TBC1D29Q9UFV1 150 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 KCNK6Q9Y257 313 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 CA5BQ9Y2D0 317 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 DOCK9Q9BZ29 2069 aa11.47□□□□□ -0.57
GGA3-217ENST00000583667 ZFC3H1O60293 1989 aaKnown RBP11.47□□□□□ -0.57
GGA3-217ENST00000583667 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.57
GGA3-217ENST00000583667 A0A1W2PPV9 198 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 KRT87PA6NCN2 255 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 E7EQ34 232 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 FFAR3O14843 346 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 GPR42O15529 346 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 NPPAP01160 153 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 THEGLP0DJG4 465 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 PRPS2P11908 318 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 F3P13726 295 aa11.46□□□□□ -0.57
GGA3-217ENST00000583667 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.57
GGA3-217ENST00000583667 JAK1P23458 1154 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms