RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 M1APQ8TC57 530 aa10□□□□□ -0.81
RFFL-209ENST00000581265 CALML6Q8TD86 181 aa10□□□□□ -0.81
RFFL-209ENST00000581265 THAP3Q8WTV1 239 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 ZNF669Q96BR6 464 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 CCDC138Q96M89 665 aa10□□□□□ -0.81
RFFL-209ENST00000581265 MACROD1Q9BQ69 325 aa10□□□□□ -0.81
RFFL-209ENST00000581265 MMP25Q9NPA2 562 aa10□□□□□ -0.81
RFFL-209ENST00000581265 LZTFL1Q9NQ48 299 aa10□□□□□ -0.81
RFFL-209ENST00000581265 FBXO6Q9NRD1 293 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 FBXO5Q9UKT4 447 aa10□□□□□ -0.81
RFFL-209ENST00000581265 SLC22A7Q9Y694 548 aa10□□□□□ -0.81
RFFL-209ENST00000581265 NF1P21359 2839 aa10□□□□□ -0.81
RFFL-209ENST00000581265 OR2W5A6NFC9 320 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 GOLGA6L6A8MZA4 724 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SGK494L7N484 410 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 CDK2AP1O14519 115 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 TTI1O43156 1089 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 LCMT2O60294 686 aaKnown RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 SLC19A2O60779 497 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 STATHP02808 62 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 F7P08709 466 aaPredicted RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 CCDC175P0C221 793 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 NPPBP16860 134 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 IL1RNP18510 177 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 AGAP20933 346 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 HTR1EP28566 365 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 CD96P40200 585 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SLC1A2P43004 574 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 TBPL1P62380 186 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 TIAL1Q01085 375 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFFL-209ENST00000581265 TUBA3CQ13748 450 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 NSDHLQ15738 373 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 EXT1Q16394 746 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 MEP1AQ16819 746 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 MFSD4BQ5TF39 518 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 CAPN13Q6MZZ7 669 aaPredicted RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 LRRC8EQ6NSJ5 796 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 TTC27Q6P3X3 843 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 TUBA3EQ6PEY2 450 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 AGTRAPQ6RW13 159 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 PIWIL4Q7Z3Z4 852 aaKnown RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 ASPGQ86U10 573 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 CDH24Q86UP0 819 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 C17orf64Q86WR6 236 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 PDSS2Q86YH6 399 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 CPNE9Q8IYJ1 553 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 MMP21Q8N119 569 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 BEST3Q8N1M1 668 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 KCT2Q8NC54 265 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 ADAMTS18Q8TE60 1221 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SLC13A3Q8WWT9 602 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SIGLEC10Q96LC7 697 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SERPINB12Q96P63 405 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 UTP23Q9BRU9 249 aaKnown RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 AARSD1Q9BTE6 412 aaKnown RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 SGPP1Q9BX95 441 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 KCNK13Q9HB14 408 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 PARVBQ9HBI1 364 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 ANKHQ9HCJ1 492 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 C20orf96Q9NUD7 363 aaPredicted RBP9.99□□□□□ -0.81
RFFL-209ENST00000581265 HCN3Q9P1Z3 774 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 PDE10AQ9Y233 779 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 ZNF835Q9Y2P0 537 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 NEU2Q9Y3R4 380 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 SCN3AQ9NY46 2000 aa9.99□□□□□ -0.81
RFFL-209ENST00000581265 FEZF1A0PJY2 475 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 ASPDHA6ND91 283 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 MAGEB17A8MXT2 336 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 GOLGA8MH3BSY2 632 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 SLC16A5O15375 505 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 MLYCDO95822 493 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 C8GP07360 202 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 CCND1P24385 295 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 GRK3P35626 688 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 COILP38432 576 aaPredicted RBP9.98□□□□□ -0.81
RFFL-209ENST00000581265 CASP6P55212 293 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 PMP22Q01453 160 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 RHAGQ02094 409 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 NAE1Q13564 534 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 HSP90AA5PQ58FG0 334 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 FCRLBQ6BAA4 426 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 SPINK14Q6IE38 97 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 UGT3A1Q6NUS8 523 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 LCTLQ6UWM7 567 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 Q6ZPB1 254 aaPredicted RBP9.98□□□□□ -0.81
RFFL-209ENST00000581265 SLC26A11Q86WA9 606 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 CRLF3Q8IUI8 442 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 LGI4Q8N135 537 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 AGGF1Q8N302 714 aaeCLIP9.98□□□□□ -0.81
RFFL-209ENST00000581265 AFAP1L2Q8N4X5 818 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 MFSD9Q8NBP5 474 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 ABHD11Q8NFV4 315 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 OR4K1Q8NGD4 311 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 EEF1AKMT1Q8WVE0 214 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 MAGOHBQ96A72 148 aaKnown RBP9.98□□□□□ -0.81
RFFL-209ENST00000581265 SCMH1Q96GD3 660 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 GPR137Q96N19 417 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 SIGLEC12Q96PQ1 595 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 OR1F2PQ96R84 312 aa9.98□□□□□ -0.81
RFFL-209ENST00000581265 LPAR4Q99677 370 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms