RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 NDUFB4O95168 129 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TTLL1O95922 423 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MOCS2O96007 188 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 LIPFP07098 398 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CSN3P07498 182 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 YES1P07947 543 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CLUP10909 449 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RALAP11233 206 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RPA2P15927 270 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ATP6V1C1P21283 382 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ALDH4A1P30038 563 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 HLA-FP30511 346 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 IDUAP35475 653 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GNL1P36915 607 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CDKN1AP38936 164 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CCT6AP40227 531 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 SOX2P48431 317 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 UBE2HP62256 183 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CFHR1Q03591 330 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 HSF2Q03933 536 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GAGE2BQ13066 116 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 PRKAA1Q13131 559 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MAD2L1Q13257 205 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 PDIA5Q14554 519 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 EFTUD2Q15029 972 aaKnown RBP eCLIP2.97□□□□□ -1.934e-6■■□□□ 11.5
KPNB1-208ENST00000580019 HADHQ16836 314 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CFAP221Q4G0U5 840 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GAGE2EQ4V326 116 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 LBHQ53QV2 105 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 LDLRAP1Q5SW96 308 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 C9orf50Q5SZB4 431 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 DCST1Q5T197 706 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 LYSMD4Q5XG99 296 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GAGE2AQ6NT46 116 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 PMF1Q6P1K2 205 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 BCDIN3DQ7Z5W3 292 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ASPGQ86U10 573 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 AMIGO1Q86WK6 493 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TMPRSS12Q86WS5 348 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 NUDT13Q86X67 352 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MEX3DQ86XN8 651 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 SLC22A9Q8IVM8 553 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RYBPQ8N488 228 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ANKRD13CQ8N6S4 541 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 EMC1Q8N766 993 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GBP7Q8N8V2 638 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 FADS6Q8N9I5 356 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TERB1Q8NA31 727 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 AKR7LQ8NHP1 331 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 SLC26A7Q8TE54 656 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 FAM46BQ96A09 425 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ABHD8Q96I13 439 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 THOC3Q96J01 351 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ZNF333Q96JL9 665 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RBM14Q96PK6 669 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 SECISBP2Q96T21 854 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MMS19Q96T76 1030 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 COQ7Q99807 217 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 DDX50Q9BQ39 737 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 SH2D3AQ9BRG2 576 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 FNDC11Q9BVV2 318 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GATA5Q9BWX5 397 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 FTHL17Q9BXU8 183 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TRPV6Q9H1D0 765 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 HIPK2Q9H2X6 1198 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 PNNQ9H307 717 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TBC1D17Q9HA65 648 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ZNF304Q9HCX3 659 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MKKSQ9NPJ1 570 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RPRD1BQ9NQG5 326 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 FAM207AQ9NSI2 230 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TRNAU1APQ9NX07 287 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 CISD1Q9NZ45 108 aaKnown RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 NDUFA13Q9P0J0 144 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ATXN10Q9UBB4 475 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 GAGE2DQ9UEU5 116 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ACSL5Q9ULC5 683 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TTC7AQ9ULT0 858 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 TMEM184BQ9Y519 407 aaPredicted RBP2.97□□□□□ -1.93
KPNB1-208ENST00000580019 STON1Q9Y6Q2 735 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 EFCAB6Q5THR3 1501 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 ADCY9O60503 1353 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 MAP3K5Q99683 1374 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 NPC1L1Q9UHC9 1359 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 PIK3C2BO00750 1634 aa2.97□□□□□ -1.93
KPNB1-208ENST00000580019 RPRD2Q5VT52 1461 aaKnown RBP2.96□□□□□ -1.93
KPNB1-208ENST00000580019 ABCC5O15440 1437 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 ADGRL3Q9HAR2 1447 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 KIAA1107Q9UPP5 1409 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 A0A0U1RQJ8 604 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 TMEM221A6NGB7 291 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 ANKDD1BA6NHY2 528 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 VWC2LB2RUY7 222 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 HNRNPCL2B2RXH8 293 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 E9PI62 339 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 J3QR06 171 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 K7EQM0 130 aa2.96□□□□□ -1.94
KPNB1-208ENST00000580019 XPO1O14980 1071 aaKnown RBP2.96□□□□□ -1.94
KPNB1-208ENST00000580019 PLPP2O43688 288 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms