RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CLEC3AO75596 197 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR2B3O76000 313 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 EIF2S1P05198 315 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SERPIND1P05546 499 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CAPN1P07384 714 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZNF10P21506 573 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RBMS1P29558 406 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PIK3CBP42338 1070 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MAPK10P53779 464 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ARSFP54793 590 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 VSX2P58304 361 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 STXBP1P61764 594 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 YBX1P67809 324 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MC2RQ01718 297 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 MEF2AQ02078 507 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TGM3Q08188 693 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PWP1Q13610 501 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 GRM7Q14831 915 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZRSR2Q15696 482 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 GPR19Q15760 415 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZIC1Q15915 447 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FAM214AQ32MH5 1076 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 C3orf38Q5JPI3 329 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 DCAF12Q5T6F0 453 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 YOD1Q5VVQ6 348 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FRG2Q64ET8 278 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FOXR1Q6PIV2 292 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RPS27LQ71UM5 84 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 LAS2Q8IYD9 372 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CLYBLQ8N0X4 340 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 LSMEM2Q8N112 164 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CDYL2Q8N8U2 506 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SRFBP1Q8NEF9 429 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR7G3Q8NG95 312 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SLC13A3Q8WWT9 602 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SELENOMQ8WWX9 145 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZCCHC14Q8WYQ9 949 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 ZNF501Q96CX3 271 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FCRL4Q96PJ5 515 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FRG2BQ96QU4 278 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OR2A5Q96R48 311 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TAAR9Q96RI9 348 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NDC1Q9BTX1 674 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RHBGQ9H310 441 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 FAM60AQ9NP50 221 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 OCIAD1Q9NX40 245 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SIDT1Q9NXL6 827 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SLC39A1Q9NY26 324 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 PILRAQ9UKJ1 303 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SRPK3Q9UPE1 567 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 RAP2CQ9Y3L5 183 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 TSC22D4Q9Y3Q8 395 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 NEUROG3Q9Y4Z2 214 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 DMXL2Q8TDJ6 3036 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 IGF2RP11717 2491 aa10.78□□□□□ -0.68
CDK5RAP3-210ENST00000578733 SLCO1B7G3V0H7 640 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 H0YGG7 62 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CTSVO60911 334 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ULK1O75385 1050 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FGF4P08620 206 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FGF5P12034 268 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HSD3B1P14060 373 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FOLR1P15328 257 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HSD3B2P26439 372 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 BCL6P41182 706 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 HK2P52789 917 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 EMP3P54852 163 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ERVPABLB-1P60509 514 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SH3BP2P78314 561 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 BST1Q10588 318 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DDX39BQ13838 428 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 KCNAB1Q14722 419 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 IMPG1Q17R60 797 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DEFB110Q30KQ9 67 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SH2D4BQ5SQS7 431 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 WASHC2DQ5SRD0 308 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GARNL3Q5VVW2 1013 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 LETMD1Q6P1Q0 360 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 FBXO42Q6P3S6 717 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CHSY3Q70JA7 882 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 ABHD13Q7L211 337 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SYVN1Q86TM6 617 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 TMEM126BQ8IUX1 230 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 PLD3Q8IV08 490 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CKAP2Q8WWK9 683 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 COL26A1Q96A83 441 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CMTM7Q96FZ5 175 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 CCT7Q99832 543 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 DDA1Q9BW61 102 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 SCNM1Q9BWG6 230 aa10.77□□□□□ -0.69
CDK5RAP3-210ENST00000578733 B3GNT4Q9C0J1 378 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms