RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 SLC13A3Q8WWT9 602 aa21.1■□□□□ 0.97
SMARCD2-206ENST00000577990 MACROD1Q9BQ69 325 aa21.1■□□□□ 0.97
SMARCD2-206ENST00000577990 WDR54Q9H977 334 aa21.1■□□□□ 0.97
SMARCD2-206ENST00000577990 CTSFQ9UBX1 484 aa21.1■□□□□ 0.97
SMARCD2-206ENST00000577990 MYO18BQ8IUG5 2567 aa21.1■□□□□ 0.97
SMARCD2-206ENST00000577990 PRPF4O43172 522 aaKnown RBP eCLIP21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 VARSP26640 1264 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 POLE2P56282 527 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 FOXL2P58012 376 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 NKG7Q16617 165 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 PDK4Q16654 411 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 ATG9BQ674R7 924 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 SLCO4C1Q6ZQN7 724 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 LRRC70Q7Z2Q7 622 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 SNX31Q8N9S9 440 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 UBLCP1Q8WVY7 318 aaPredicted RBP21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 MTBPQ96DY7 904 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 CCDC77Q9BR77 488 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 CD244Q9BZW8 370 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 NXT1Q9UKK6 140 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 MRPS2Q9Y399 296 aaKnown RBP21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 KCNMB2Q9Y691 235 aa21.09■□□□□ 0.97
SMARCD2-206ENST00000577990 A0A0A6YYC8 382 aaPredicted RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 I3L1I5 382 aaPredicted RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 FOXS1O43638 330 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 CCNT2O60583 730 aaKnown RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 H2AFYO75367 372 aaKnown RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 C1GALT1C1LP0DN25 315 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 COL6A2P12110 1019 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 MTHFD2P13995 350 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 OTX2P32243 289 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 AHRP35869 848 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 AGTR2P50052 363 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 VSNL1P62760 191 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 DSG2Q14126 1118 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 SSPNQ14714 243 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 TSNAXIP1Q2TAA8 658 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 TECRLQ5HYJ1 363 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 TMEM214Q6NUQ4 689 aaKnown RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 MMABQ96EY8 250 aaPredicted RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 SPSB2Q99619 263 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 ZNF358Q9NW07 568 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 PSMC3IPQ9P2W1 217 aaPredicted RBP21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 ZFP69BQ9UJL9 534 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 ASB1Q9Y576 335 aa21.08■□□□□ 0.97
SMARCD2-206ENST00000577990 IQANK1A0A1B0GTG1 560 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 VSTM2BA6NLU5 285 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 J3QKU1 62 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 MAP2K7O14733 419 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 CLGNO14967 610 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 NDUFS4O43181 175 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 SLC28A2O43868 658 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 UMODP07911 640 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 CXCR2P25025 360 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 AVPR1BP47901 424 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 SNRPNP63162 240 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 OCA2Q04671 838 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 PWP1Q13610 501 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 SLBPQ14493 270 aaKnown RBP eCLIP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 RBBP5Q15291 538 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 TIFABQ6ZNK6 161 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 PRICKLE2Q7Z3G6 844 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 ANKRD53Q8N9V6 530 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 KCT2Q8NC54 265 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 ZCCHC10Q8TBK6 192 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 ADNPQ9H2P0 1102 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 EHD1Q9H4M9 534 aa21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 GEMIN8Q9NWZ8 242 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 ZNF282Q9UDV7 671 aaPredicted RBP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 ASH1LQ9NR48 2969 aaKnown RBP21.07■□□□□ 0.96
SMARCD2-206ENST00000577990 RFPL1O75677 317 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 NSA2O95478 260 aaKnown RBP21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 SERPIND1P05546 499 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 RBP1P09455 135 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 GFAPP14136 432 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 RGS1Q08116 209 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 MRGPREQ86SM8 312 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 APLFQ8IW19 511 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 TMEM151BQ8IW70 566 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 CNPY4Q8N129 248 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 KRT78Q8N1N4 520 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 AMER3Q8N944 861 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 OR9A4Q8NGU2 314 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 NT5CQ8TCD5 201 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 STT3BQ8TCJ2 826 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 MOCOSQ96EN8 888 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 SOX17Q9H6I2 414 aaPredicted RBP21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 OPTCQ9UBM4 332 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 TRPC4Q9UBN4 977 aa21.06■□□□□ 0.96
SMARCD2-206ENST00000577990 IGLV3-12A0A075B6K2 115 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 ARGFXA6NJG6 315 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 K7EPI3 171 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 KLK8O60259 260 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 IL1RNP18510 177 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 EPORP19235 508 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 ALDH18A1P54886 795 aaKnown RBP21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 KCNAB2Q13303 367 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 ATP1A4Q13733 1029 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 SETDB1Q15047 1291 aa21.05■□□□□ 0.96
SMARCD2-206ENST00000577990 PFKFB4Q16877 469 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms