RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 C20orf96Q9NUD7 363 aaPredicted RBP11.33□□□□□ -0.6
PRPF8-215ENST00000576958 ITGB1BP2Q9UKP3 347 aa11.33□□□□□ -0.6
PRPF8-215ENST00000576958 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
PRPF8-215ENST00000576958 DHRS7Q9Y394 339 aa11.33□□□□□ -0.6
PRPF8-215ENST00000576958 NAALAD2Q9Y3Q0 740 aa11.33□□□□□ -0.6
PRPF8-215ENST00000576958 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
PRPF8-215ENST00000576958 H3BMM5 538 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 NSA2O95478 260 aaKnown RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 ELAVL4P26378 380 aaKnown RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 CDC25BP30305 580 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 MAGEA6P43360 314 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 AVPR1BP47901 424 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 BTG2P78543 158 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 ART3Q13508 389 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 NAE1Q13564 534 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 FAM53BQ14153 422 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 OR1C1Q15619 314 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 HSP90AA5PQ58FG0 334 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 CATSPEREQ5SY80 951 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 PLAG1Q6DJT9 500 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 H3F3CQ6NXT2 135 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 PAPD4Q6PIY7 484 aaKnown RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 BNC2Q6ZN30 1099 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 GALNTL5Q7Z4T8 443 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 IGDCC3Q8IVU1 814 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 SIAH3Q8IW03 269 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 FBXO15Q8NCQ5 510 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 SIGLEC10Q96LC7 697 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 LURAP1Q96LR2 239 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 PWWP2AQ96N64 755 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 OR4K3Q96R72 315 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 AARSD1Q9BTE6 412 aaKnown RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 RNF32Q9H0A6 362 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 KCNK13Q9HB14 408 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 CCDC177Q9NQR7 707 aaPredicted RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
PRPF8-215ENST00000576958 FBXO5Q9UKT4 447 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 HRH3Q9Y5N1 445 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 MAD1L1Q9Y6D9 718 aa11.32□□□□□ -0.6
PRPF8-215ENST00000576958 FAM237BA0A1B0GVD1 139 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 A8MUA0 341 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 NRDCO43847 1150 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 NEURL1O76050 574 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 FDXRP22570 491 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 HNF4AP41235 474 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 MAGEA3P43357 314 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 ABATP80404 500 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 THOC5Q13769 683 aaKnown RBP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 ABRAXAS2Q15018 415 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 INAQ16352 499 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 ZNF630Q2M218 657 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 AGTRAPQ6RW13 159 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 PAQR3Q6TCH7 311 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 ASPGQ86U10 573 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 CPSF7Q8N684 471 aaKnown RBP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 METTL21AQ8WXB1 218 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 KCNJ9Q92806 393 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 SCMH1Q96GD3 660 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 VPS50Q96JG6 964 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 FRMD6Q96NE9 622 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 WDR83Q9BRX9 315 aaKnown RBP11.31□□□□□ -0.6
PRPF8-215ENST00000576958 TSGA10Q9BZW7 698 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 CDCP1Q9H5V8 836 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 TMEM184CQ9NVA4 438 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 MRFAP1Q9Y605 127 aa11.31□□□□□ -0.6
PRPF8-215ENST00000576958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 SDR42E2A6NKP2 422 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 H0YIG0 161 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 ADAM10O14672 748 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 ZBTB14O43829 449 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 B4GALT2O60909 372 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 PHF2O75151 1096 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 TSPAN12O95859 305 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 CRYABP02511 175 aaKnown RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 ZNF888P0CJ79 500 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 NPPBP16860 134 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 MAOAP21397 527 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 TPP2P29144 1249 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 PTGER1P34995 402 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 SLC26A5P58743 744 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 RPS15AP62244 130 aaKnown RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 DHX9Q08211 1270 aaKnown RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 HYAL2Q12891 473 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 USP10Q14694 798 aaKnown RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 NDUFA9Q16795 377 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 C18orf21Q32NC0 220 aaPredicted RBP11.3□□□□□ -0.6
PRPF8-215ENST00000576958 TTLL9Q3SXZ7 439 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 DEFB134Q4QY38 66 aa11.3□□□□□ -0.6
PRPF8-215ENST00000576958 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms