RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 POP4O95707 220 aaKnown RBP17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 HLA-DQA2P01906 255 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 FGF4P08620 206 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 CRHBPP24387 322 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 NDUFAF6Q330K2 333 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 NPAS3Q8IXF0 933 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 OR10G6Q8NH81 332 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 DLGAP4Q9Y2H0 992 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 GMFGO60234 142 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 ETFAP13804 333 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 TCF3P15923 654 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 HOXD12P35452 270 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 CAPZA2P47755 286 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 DCDC1P59894 354 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 TGM3Q08188 693 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 TRIM71Q2Q1W2 868 aaKnown RBP17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 MAMDC4Q6UXC1 1216 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 COLGALT2Q8IYK4 626 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 CHDHQ8NE62 594 aaPredicted RBP17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 KCNH6Q9H252 994 aa17.32■□□□□ 0.36
ATPAF1-214ENST00000576409 MYADML2A6NDP7 307 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 ARHGEF33A8MVX0 844 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 NPPAP01160 153 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 SNRPD2P62316 118 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 TUBA1BP68363 451 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 HNRNPA0Q13151 305 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 BHLHB9Q6PI77 547 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 TUBA1AQ71U36 451 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 CHST9Q7L1S5 443 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 CXXC5Q7LFL8 322 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 MARCH9Q86YJ5 346 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 UBE2FQ969M7 185 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 VMP1Q96GC9 406 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 MAF1Q9H063 256 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 OR51E2Q9H255 320 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 POFUT2Q9Y2G5 429 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 HCN1O60741 890 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 FUCA1P04066 466 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 LAMP1P11279 417 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 RCVRNP35243 200 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 SEMA3AQ14563 771 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 HEPACAMQ14CZ8 416 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 GPR33Q49SQ1 333 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 TSPAN33Q86UF1 283 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 NXPE1Q8N323 547 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 FAM86B1Q8N7N1 296 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 APIPQ96GX9 242 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 ATOH8Q96SQ7 321 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 AIF1LQ9BQI0 150 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 RPN2P04844 631 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 C4BPBP20851 252 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 PPP5CP53041 499 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 SLC5A8Q8N695 610 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 KCT2Q8NC54 265 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 SLC22A4Q9H015 551 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 ELAC1Q9H777 363 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 POU2F3Q9UKI9 436 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 PLAGL1Q9UM63 463 aa17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 RPL36Q9Y3U8 105 aaKnown RBP17.31■□□□□ 0.36
ATPAF1-214ENST00000576409 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 KDELR3O43731 214 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 TLL1O43897 1013 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 KHDRBS3O75525 346 aaKnown RBP17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 HOXB6P17509 224 aaKnown RBP17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 EXOC3L2Q2M3D2 409 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 MEIOBQ8N635 442 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 C1orf74Q96LT6 269 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 A0A1B0GW55 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 CXCL14O95715 111 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L2P0CJ85 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L3P0CJ86 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L4P0CJ87 422 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L5P0CJ88 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L6P0CJ89 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4L7P0CJ90 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 PFKLP17858 780 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 HTR1BP28222 390 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 HNF1BP35680 557 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DSTNP60981 165 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 CBX2Q14781 532 aaPredicted RBP17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 AAK1Q2M2I8 961 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 FAM214AQ32MH5 1076 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 POMZP3Q6PJE2 187 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 OR2AP1Q8NGE2 309 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 CD200R1Q8TD46 325 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 RDH12Q96NR8 316 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 DUX4Q9UBX2 424 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 B4GALT6Q9UBX8 382 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 SPEF1Q9Y4P9 236 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 C8orf89P0DMQ9 161 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 GALNT1Q10472 559 aaPredicted RBP17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 ARSIQ5FYB1 569 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 ARL9Q6T311 187 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 TMEM151AQ8N4L1 468 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 MINDY2Q8NBR6 621 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 KCTD7Q96MP8 289 aa17.3■□□□□ 0.36
ATPAF1-214ENST00000576409 COCHO43405 550 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms