RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 ESRP2Q9H6T0 727 aaKnown RBP5.52□□□□□ -1.53
VPS53-219ENST00000576019 RPAP3Q9H6T3 665 aaPredicted RBP5.52□□□□□ -1.53
VPS53-219ENST00000576019 SEBOXQ9HB31 216 aaPredicted RBP5.52□□□□□ -1.53
VPS53-219ENST00000576019 HOXC10Q9NYD6 342 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 KCNN3Q9UGI6 736 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 GPR132Q9UNW8 380 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 PLEKHA6Q9Y2H5 1048 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 NFE2L3Q9Y4A8 694 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
VPS53-219ENST00000576019 SIPA1L1O43166 1804 aa5.52□□□□□ -1.53
VPS53-219ENST00000576019 A0A1W2PPQ1 181 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 C17orf102A2RUQ5 167 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 HEPACAM2A8MVW5 462 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 H0YIG0 161 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 TMEM189-UBE2V1I3L0A0 370 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 SGK1O00141 431 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 HSPB6O14558 160 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ANGPT2O15123 496 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 SLC16A5O15375 505 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 TSPAN1O60635 241 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ATP9AO75110 1047 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ADCY5O95622 1261 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ANKRD34CP0C6C1 535 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 PRKAR2BP31323 418 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 DCTDP32321 178 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 SOX6P35712 828 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 TRPC1P48995 793 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 RGS7P49802 495 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ASCL1P50553 236 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 METAP2P50579 478 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS53-219ENST00000576019 OVGP1Q12889 678 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 SCGB2A2Q13296 93 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 UBE2V1Q13404 147 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 STIM1Q13586 685 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 PDE7AQ13946 482 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 PTGISQ16647 500 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ENTPD8Q5MY95 495 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 GGNBP1Q5YKI7 109 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 KIAA0895LQ68EN5 471 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 FAM133AQ8N9E0 248 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 KIAA0895Q8NCT3 520 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 MOB3AQ96BX8 217 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ZNF689Q96CS4 500 aaPredicted RBP5.51□□□□□ -1.53
VPS53-219ENST00000576019 TUBGCP3Q96CW5 907 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ORAI1Q96D31 301 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 MED8Q96G25 268 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 OR6C1Q96RD1 312 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 GFI1Q99684 422 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 ASCL2Q99929 193 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 C16orf70Q9BSU1 422 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 PUS3Q9BZE2 481 aaKnown RBP5.51□□□□□ -1.53
VPS53-219ENST00000576019 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 DPAGT1Q9H3H5 408 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 MAGIXQ9H6Y5 334 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 COX16Q9P0S2 106 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 RHCGQ9UBD6 479 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 TRIM10Q9UDY6 481 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 FAM153AQ9UHL3 310 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 RCOR1Q9UKL0 485 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 DNPEPQ9ULA0 475 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 Q9Y3F1 56 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 TMEM184BQ9Y519 407 aaPredicted RBP5.51□□□□□ -1.53
VPS53-219ENST00000576019 ASB3Q9Y575 518 aa5.51□□□□□ -1.53
VPS53-219ENST00000576019 FNDC1Q4ZHG4 1894 aaPredicted RBP5.51□□□□□ -1.53
VPS53-219ENST00000576019 JMJD1CQ15652 2540 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 A0A1W2PPW3 197 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 TMEM200CA6NKL6 621 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 F8WDY8 70 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 J3QR06 171 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 RHODO00212 210 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 CDX4O14627 284 aaPredicted RBP5.5□□□□□ -1.53
VPS53-219ENST00000576019 WNT1P04628 370 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 ELFN1P0C7U0 828 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 MED14OSP0DP75 135 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 FUT1P19526 365 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 HRH2P25021 359 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 CHATP28329 748 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 GDI1P31150 447 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 HTR6P50406 440 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 MAPK12P53778 367 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 MTCP1P56278 107 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 EGR4Q05215 589 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 FAM27E3Q08E93 113 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 MVPQ14764 893 aaKnown RBP5.5□□□□□ -1.53
VPS53-219ENST00000576019 PRSS55Q6UWB4 352 aaPredicted RBP5.5□□□□□ -1.53
VPS53-219ENST00000576019 TPRG1Q6ZUI0 275 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 SLC29A4Q7RTT9 530 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 NRARPQ7Z6K4 114 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 CUZD1Q86UP6 607 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 LONP2Q86WA8 852 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 ZNF276Q8N554 614 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 ZNF611Q8N823 705 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 SLC24A4Q8NFF2 622 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 OR52K2Q8NGK3 314 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 OR52M1Q8NGK5 317 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 SELENOMQ8WWX9 145 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 ADAMTS14Q8WXS8 1223 aa5.5□□□□□ -1.53
VPS53-219ENST00000576019 APBB2Q92870 758 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms