RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 RGS16O15492 202 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 EFSO43281 561 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 UGDHO60701 494 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 RECKO95980 971 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ATP5F1P24539 256 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 PTPN4P29074 926 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 HNF4AP41235 474 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 CASP2P42575 452 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCNG1P51959 295 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 NAA20P61599 178 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 NFKB2Q00653 900 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC18A2Q05940 514 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 PCDH1Q08174 1060 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 DOC2AQ14183 400 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 HERC3Q15034 1050 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 NCF4Q15080 339 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ARHGAP40Q5TG30 622 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 MLIPQ5VWP3 458 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 LIPJQ5W064 366 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF385CQ66K41 422 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 INO80CQ6PI98 192 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 LRIG3Q6UXM1 1119 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 SH2D5Q6ZV89 423 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ABHD13Q7L211 337 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 VN1R4Q7Z5H5 301 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 TRABD2AQ86V40 505 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 SRRM1Q8IYB3 904 aaKnown RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 C4orf33Q8N1A6 199 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF740Q8NDX6 193 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 RDH11Q8TC12 318 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 STARD8Q92502 1023 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 COL26A1Q96A83 441 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 FKBP10Q96AY3 582 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 REPS1Q96D71 796 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 WDR34Q96EX3 536 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 MAGEB10Q96LZ2 347 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 IPPKQ9H8X2 491 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ACTR8Q9H981 624 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ANKHQ9HCJ1 492 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF304Q9HCX3 659 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 COPG2Q9UBF2 871 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 NXT1Q9UKK6 140 aaKnown RBP12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 SCN3AQ9NY46 2000 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCDC88CQ9P219 2028 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 USP24Q9UPU5 2620 aa12.16□□□□□ -0.46
TRAPPC1-206ENST00000573989 EPG5Q9HCE0 2579 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 GOLGA6L10A6NI86 522 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 A8MT66 165 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 E2F3O00716 465 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 P2RX6O15547 441 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CREG1O75629 220 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SIX3O95343 332 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ONECUT2O95948 504 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ALBP02768 609 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SERPINA6P08185 405 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 MYL2P10916 166 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ITGAXP20702 1163 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 FBLP22087 321 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SERPINB1P30740 379 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 STXBP1P61764 594 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 HERVK_113P63132 956 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 PHEXP78562 749 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 OCA2Q04671 838 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ZNF844Q08AG5 666 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CRTC2Q53ET0 693 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 GRHL2Q6ISB3 625 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 TMEM214Q6NUQ4 689 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 MED27Q6P2C8 311 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 C16orf46Q6P387 395 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 FAM198BQ6UWH4 519 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 GPR155Q7Z3F1 870 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 GOLGA7Q7Z5G4 137 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SYVN1Q86TM6 617 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 MYLK4Q86YV6 388 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 IQCKQ8N0W5 287 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ENDOVQ8N8Q3 282 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CCT6BQ92526 530 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 MMABQ96EY8 250 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 APOPT1Q96IL0 206 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 C10orf90Q96M02 699 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ERVK-6Q9BXR3 956 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 STMN4Q9H169 189 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SPNS1Q9H2V7 528 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CENPHQ9H3R5 247 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ACTL8Q9H568 366 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 AKIRIN1Q9H9L7 192 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 CPNE5Q9HCH3 593 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 MKS1Q9NXB0 559 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ADGRE2Q9UHX3 823 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 PCDHGA11Q9Y5H2 935 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 SLC22A7Q9Y694 548 aa12.15□□□□□ -0.46
TRAPPC1-206ENST00000573989 A0A088AWK7 358 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 H0YIG0 161 aa12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 TERTO14746 1132 aaKnown RBP12.14□□□□□ -0.47
TRAPPC1-206ENST00000573989 CTIFO43310 598 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms