RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRPV5Q9NQA5 729 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 PCDHB16Q9NRJ7 776 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ANO10Q9NW15 660 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 POU2F3Q9UKI9 436 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 ACSL5Q9ULC5 683 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 COQ4Q9Y3A0 265 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 LOXL2Q9Y4K0 774 aa3.86□□□□□ -1.79
NUP88-202ENST00000570937 TRIP11Q15643 1979 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GTPBP10A4D1E9 387 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 FAM172BPA6NC97 362 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 F8VP50 259 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PES1O00541 588 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 SLC9A3R1O14745 358 aaPredicted RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 CHADO15335 359 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 MED7O43513 233 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 LMX1BO60663 402 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PAGE4O60829 102 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CAVIN2O95810 425 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 AGR2O95994 175 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PLGP00747 810 aaPredicted RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 SP1P08047 785 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PAEPP09466 180 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 VDRP11473 427 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 ZNF182P17025 639 aaPredicted RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 HMGA1P17096 107 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 CEBPBP17676 345 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 MFAP3P55082 362 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CASP6P55212 293 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 STX17P56962 302 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 SNX16P57768 344 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 RPL7AP62424 266 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 TPM4P67936 248 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PITX1P78337 314 aaPredicted RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 PDE1BQ01064 536 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GCNT1Q02742 428 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 FOXM1Q08050 763 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GRIK2Q13002 908 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CUL2Q13617 745 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CCNG2Q16589 344 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 STX1AQ16623 288 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DECR1Q16698 335 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GLIPR1L2Q4G1C9 344 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CBWD6Q4V339 395 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CBWD3Q5JTY5 395 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 C1orf220Q5T0J3 134 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 STPG1Q5TH74 334 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 SPOPLQ6IQ16 392 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DUS1LQ6P1R4 473 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 BRAT1Q6PJG6 821 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GSG1LQ6UXU4 331 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 ZNF852Q6ZMS4 543 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GBP6Q6ZN66 633 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DPPA4Q7L190 304 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 GSTA5Q7RTV2 222 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 NRROSQ86YC3 692 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 BEST3Q8N1M1 668 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 ARHGAP18Q8N392 663 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 ITFG1Q8TB96 612 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 METTL6Q8TCB7 284 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 SLC2A14Q8TDB8 520 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DUSP19Q8WTR2 217 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 SEMA4DQ92854 862 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DNASE1L2Q92874 299 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 FGF14Q92915 247 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 IGSF8Q969P0 613 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 FAM149B1Q96BN6 582 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 TCEAL4Q96EI5 215 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 TMEM68Q96MH6 324 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 KCNK16Q96T55 309 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 ACOX2Q99424 681 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 MTERF1Q99551 399 aaKnown RBP3.85□□□□□ -1.79
NUP88-202ENST00000570937 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DUSP16Q9BY84 665 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 UBXN6Q9BZV1 441 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CSTL1Q9H114 145 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 DPEP3Q9H4B8 488 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CSNK1G1Q9HCP0 422 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 TRPC7Q9HCX4 862 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 CISHQ9NSE2 258 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 BCCIPQ9P287 314 aaKnown RBP eCLIP3.85□□□□□ -1.79
NUP88-202ENST00000570937 MKLN1Q9UL63 735 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PADI1Q9ULC6 663 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 TCHHQ07283 1943 aa3.85□□□□□ -1.79
NUP88-202ENST00000570937 PDCD11Q14690 1871 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 ATG2AQ2TAZ0 1938 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 MTCL1Q9Y4B5 1905 aaKnown RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 KANSL1LA0AUZ9 987 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 ZNF840PA6NDX5 716 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 HEPACAM2A8MVW5 462 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 C16orf97H3BN30 126 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 P2RY10O00398 339 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 VCYO14598 125 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 SPINT2O43291 252 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 GRID2O43424 1007 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 HCRTO43612 131 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 CRYAAP02489 173 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 MBL2P11226 248 aaPredicted RBP3.84□□□□□ -1.79
NUP88-202ENST00000570937 RALAP11233 206 aa3.84□□□□□ -1.79
NUP88-202ENST00000570937 KRT5P13647 590 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms